Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J02
         (946 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.8  
01_01_0715 - 5542648-5543219,5543352-5543544                           25   2.3  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.3  
03_02_0576 - 9587698-9588636                                           30   2.3  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    28   9.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 478 PPPXGXXXXXXPPPPPXGG 422
           PPP G      PPPPP GG
Sbjct: 367 PPPPGGKKGGPPPPPPKGG 385


>01_01_0715 - 5542648-5543219,5543352-5543544
          Length = 254

 Score = 24.6 bits (51), Expect(2) = 2.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 445 PPPPPXGGGXF 413
           PPPPP  GG F
Sbjct: 190 PPPPPPAGGNF 200



 Score = 24.2 bits (50), Expect(2) = 2.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 478 PPPXGXXXXXXPPPPPXGG 422
           P P        PPPPP GG
Sbjct: 180 PAPAPAGSPPPPPPPPAGG 198


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = -1

Query: 493  FXXWXPPPXGXXXXXXPPPPPXGGGXFX*XXXXPXXXGXFXPXGXWGG 350
            F    PPP        PPPPP G G        P       P G  GG
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG 1216



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 478  PPPXGXXXXXXPPPPPXGG 422
            PPP        PPPPP GG
Sbjct: 1099 PPPPSIGAGAPPPPPPPGG 1117


>03_02_0576 - 9587698-9588636
          Length = 312

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 517 KKKKXFXFFXXWXPPPXGXXXXXXPPPPP 431
           +++K F     W PPP        PPPPP
Sbjct: 219 RQRKSFSGVIKWRPPPAPAAAAARPPPPP 247


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 478 PPPXGXXXXXXPPPPPXG 425
           PPP G      PPPPP G
Sbjct: 932 PPPPGKPGGPPPPPPPPG 949


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,732,391
Number of Sequences: 37544
Number of extensions: 258114
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)