Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_J01
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 29 3.7
02_04_0103 - 19768288-19768737 29 3.7
11_04_0350 - 16658497-16659015 29 6.5
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 29 6.5
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 6.5
02_01_0475 + 3422629-3422695,3422960-3423216 29 6.5
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXKXXXXG 495
KKK KKK KKK KK K K K G
Sbjct: 32 KKKKKKKKKKKKKKKKKKKKKKKKKLLG 59
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 28 KKKKKKKKKKKKKKKKKKKKKKK 50
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 29 KKKKKKKKKKKKKKKKKKKKKKK 51
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 30 KKKKKKKKKKKKKKKKKKKKKKK 52
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 31 KKKKKKKKKKKKKKKKKKKKKKK 53
>02_04_0103 - 19768288-19768737
Length = 149
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXKXXXXG 495
KKK KKK KKK KK K K K G
Sbjct: 113 KKKKKKKKKKKKKKKKKKKKKKKKKKKG 140
>11_04_0350 - 16658497-16659015
Length = 172
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 32 KKKKKKKKKKKKKKKKKKKKKKK 54
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 373 KKKKKKKKKKKKKKKKKKKKKKK 395
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 374 KKKKKKKKKKKKKKKKKKKKKKK 396
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 375 KKKKKKKKKKKKKKKKKKKKKKK 397
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 376 KKKKKKKKKKKKKKKKKKKKKKK 398
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 377 KKKKKKKKKKKKKKKKKKKKKKK 399
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 68 KKKKKKKKKKKKKKKKKKKKKNK 90
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 70 KKKKKKKKKKKKKKKKKKKNKKK 92
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 72 KKKKKKKKKKKKKKKKKNKKKKK 94
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 73 KKKKKKKKKKKKKKKKNKKKKKK 95
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKK 96
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 77 KKKKKKKKKKKKNKKKKKKKKKK 99
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 81 KKKKKKKKNKKKKKKKKKKKKKK 103
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 85 KKKKNKKKKKKKKKKKKKKKKKK 107
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 43 KKKKKKKKKKKKKKKKKKKKKKK 65
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 44 KKKKKKKKKKKKKKKKKKKKKKK 66
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 45 KKKKKKKKKKKKKKKKKKKKKKK 67
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 46 KKKKKKKKKKKKKKKKKKKKKKK 68
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 47 KKKKKKKKKKKKKKKKKKKKKKK 69
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 48 KKKKKKKKKKKKKKKKKKKKKKK 70
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 49 KKKKKKKKKKKKKKKKKKKKKKK 71
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 412 KKKXXKKKXKKKXKKXXXKXKXK 480
KKK KKK KKK KK K K K
Sbjct: 51 KKKKKKKKKKKKKKKKKKKKKNK 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,604,442
Number of Sequences: 37544
Number of extensions: 156681
Number of successful extensions: 523
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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