Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I20
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    30   2.5  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   3.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.3  
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002...    28   7.5  

>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -2

Query: 304  PPXXXXGGPXPPQKKXXXKXGGXFXPPPPGGXL 206
            PP    G P PP      K GG   PPPP G L
Sbjct: 921  PPPRPPGAPPPPPPPG--KPGGPPPPPPPPGSL 951


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -2

Query: 301 PXXXXGGPXPPQKKXXXKXGGXFXPPPPGGXLXGG 197
           P    GG  PP        GG   PP PGG   GG
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -2

Query: 304 PPXXXXGGPXPPQKKXXXKXGGXFXPPPPGG 212
           PP    G   PP      K GG   PPP GG
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -1

Query: 338 PXKXPXXXXXXPPFXFXGGPXPPPKKXXXKKXGGVXXTP 222
           P K P      PP    GGP PPP K    +       P
Sbjct: 358 PPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


>04_04_1466 -
           33799104-33799229,33799659-33799669,33800052-33800200,
           33800261-33800299,33800690-33800746,33800839-33801628,
           33801705-33801980,33802051-33802117,33802211-33802285,
           33802618-33802812,33802927-33803076,33803152-33803522,
           33804070-33804193,33804246-33804275,33804306-33804417,
           33804919-33804985,33805138-33805180,33805768-33805872
          Length = 928

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = -2

Query: 304 PPXXXXGGPXPPQKKXXXKXGGXFXPPPPG 215
           PP    G P PP           + PPPPG
Sbjct: 5   PPLLAAGNPWPPHHAAAQPPPPSYPPPPPG 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,139,453
Number of Sequences: 37544
Number of extensions: 369269
Number of successful extensions: 381
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)