Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I19
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          38   1e-04
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      38   1e-04
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          35   9e-04
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      35   9e-04

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 173 FVEKQKQILSFFQXVXQ-LNTXXXXXXXXXXXXXEMNMDNYTNKKAVEEFLKMYRTGFMP 349
           F+ KQK++ +    V Q                 E N+D+YTN  AV+EFL +Y+ G +P
Sbjct: 33  FLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSIYKHGMLP 92

Query: 350 K 352
           +
Sbjct: 93  R 93


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 173 FVEKQKQILSFFQXVXQ-LNTXXXXXXXXXXXXXEMNMDNYTNKKAVEEFLKMYRTGFMP 349
           F+ KQK++ +    V Q                 E N+D+YTN  AV+EFL +Y+ G +P
Sbjct: 33  FLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSIYKHGMLP 92

Query: 350 K 352
           +
Sbjct: 93  R 93


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 35.1 bits (77), Expect = 9e-04
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 173 FVEKQKQILSFFQXVXQLNTXXXXXXXXXXXXXEM-NMDNYTNKKAVEEFLKMYRTGFMP 349
           +V +QK I   F  V Q                 + N+DNY +K+AV EF+++ + G +P
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLP 90

Query: 350 K 352
           +
Sbjct: 91  R 91


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 35.1 bits (77), Expect = 9e-04
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 173 FVEKQKQILSFFQXVXQLNTXXXXXXXXXXXXXEM-NMDNYTNKKAVEEFLKMYRTGFMP 349
           +V +QK I   F  V Q                 + N+DNY +K+AV EF+++ + G +P
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLP 90

Query: 350 K 352
           +
Sbjct: 91  R 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,012
Number of Sequences: 438
Number of extensions: 761
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)