Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_I16
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.55
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 5.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 5.1
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 638 PPPXXXPPXKKNPXTPXXPXXGXXPPPPXP 727
PPP PP P P P PPPP P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSA--PPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 638 PPPXXXPPXKKNPXTPXXPXXGXXPPPPXP 727
PPP PP P T PPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +2
Query: 464 PXETPNXXPXAXKXP---PPHRXPFXXSP-PSPGAXXPPXFLXXXXXXXXXXXXXGGXXX 631
P P+ P K PP P P P P PP G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG--VP 1189
Query: 632 XXPPPXXXPPXKK-NPXTPXXPXXGXXPPPPXP 727
PPP PP K + P P PP P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/93 (24%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = +2
Query: 446 KXGXPXPXETPNXXPXAXKXPPP-HRXPFXXSPPSPGAXXPPXFLXXXXXXXXXXXXXGG 622
K G P + P PPP H P PP P P +
Sbjct: 215 KPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM-- 272
Query: 623 XXXXXPPPXXXPPXKKNPXTPXXPXXGXXPPPP 721
PPP P + P P G PPP
Sbjct: 273 ----PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/91 (24%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +2
Query: 452 GXPXPXETPNXXPXAXKXPPP-HRXPFXXSPPSPGAXXPPXFLXXXXXXXXXXXXXGGXX 628
G P + P PPP H P PP P P +
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---- 259
Query: 629 XXXPPPXXXPPXKKNPXTPXXPXXGXXPPPP 721
PPP P + P P G PPP
Sbjct: 260 --PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/91 (24%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +2
Query: 452 GXPXPXETPNXXPXAXKXPPP-HRXPFXXSPPSPGAXXPPXFLXXXXXXXXXXXXXGGXX 628
G P + P PPP H P PP P P +
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---- 298
Query: 629 XXXPPPXXXPPXKKNPXTPXXPXXGXXPPPP 721
PPP P + P P G PPP
Sbjct: 299 --PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/91 (24%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +2
Query: 452 GXPXPXETPNXXPXAXKXPPP-HRXPFXXSPPSPGAXXPPXFLXXXXXXXXXXXXXGGXX 628
G P + P PPP H P PP P P +
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---- 311
Query: 629 XXXPPPXXXPPXKKNPXTPXXPXXGXXPPPP 721
PPP P + P P G PPP
Sbjct: 312 --PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 617 GGXXXXXPPPXXXPPXKKNPXTPXXPXXGXXPPPPXP 727
G PPP P P P PPPP P
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Frame = +2
Query: 638 PPPXXXPPXKKN---PXTPXXPXXGXXPPPPXP 727
PPP P P P P G PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,514,525
Number of Sequences: 5004
Number of extensions: 22068
Number of successful extensions: 93
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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