Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I11
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical p...    30   2.6  

>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 201 AKNGSAESAFSTTLTGDLSVGXSQQSEDEK-HEELHFEMSTSEHRRK 64
           A++ S+ S+ S++ +   S   S +SEDEK H + H +    +H +K
Sbjct: 157 AESSSSSSSSSSSSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKK 203



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 201 AKNGSAESAFSTTLTGDLSVGXSQQSEDEK-HEELHFEMSTSEHRRK 64
           + + S+ S+ S++ +   S   S +SEDEK H + H +    +H +K
Sbjct: 110 SSSSSSSSSSSSSSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKK 156



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 195 NGSAESAFSTTLTGDLSVGXSQQSEDEKHEELHFEMSTSEHRRK 64
           + S+ S+ S++ +   S   S +SEDEKH   H + +  +H +K
Sbjct: 207 SSSSSSSSSSSSSSSSSSSSSSESEDEKHH--HKKHAVKKHHKK 248


>Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical
           protein R10E4.11 protein.
          Length = 302

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 147 SVGXSQQSEDEKHEELHFEMSTSEHRRKDVKLCAKXVR 34
           SV  S     E+HE+ H+  STS+H   + + C +  R
Sbjct: 198 SVCKSYAENVEEHEKSHYRTSTSKHAVMECRYCVRQFR 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,049,870
Number of Sequences: 27780
Number of extensions: 201743
Number of successful extensions: 486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)