Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I10
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0227 - 1663375-1665405                                           30   2.8  
05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182,791...    29   4.8  
07_01_0229 - 1672126-1673976,1674427-1675404                           29   6.4  

>07_01_0227 - 1663375-1665405
          Length = 676

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -2

Query: 299 FGMHIPPTIIDPSGQLPELRTYSTRP 222
           FG++IP  IIDP+ +LP+L   S RP
Sbjct: 263 FGLNIPAPIIDPT-KLPKLPNLSPRP 287


>05_03_0062 -
           7917596-7918129,7918279-7918447,7919007-7919182,
           7919235-7919360,7920196-7920342
          Length = 383

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 250 LNLEHIRLALSNYSRKMQLCLRLLTI 173
           +NL+HIRL L  YS  + +C  +L +
Sbjct: 263 MNLKHIRLELMQYSSALDVCKHILNM 288


>07_01_0229 - 1672126-1673976,1674427-1675404
          Length = 942

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 299 FGMHIPPTIIDPSGQLPELRTYSTRP 222
           FG++IP  IIDP+ +LP+L   S +P
Sbjct: 266 FGLNIPAPIIDPT-KLPKLPNLSPKP 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,101,244
Number of Sequences: 37544
Number of extensions: 226977
Number of successful extensions: 389
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)