Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I10
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73905-3|CAA98111.3|  357|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z73905-3|CAA98111.3|  357|Caenorhabditis elegans Hypothetical
           protein C32C4.3 protein.
          Length = 357

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 466 MFCYFLFIFILYVGIVTNFICKPCKAIIK 552
           M+C FLF+ I Y+ +V+N I  PC+ + K
Sbjct: 1   MWC-FLFLLISYISLVSNAILNPCEVLDK 28


>Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical
           protein F46F2.2c protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 480 FIYFYIICWNSYKFY 524
           F Y Y+  WN+YKFY
Sbjct: 463 FCYDYVFDWNTYKFY 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,608,231
Number of Sequences: 27780
Number of extensions: 231874
Number of successful extensions: 659
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)