Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_I09
(980 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.020
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.027
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.035
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.046
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.76
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 28 2.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 7.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 7.1
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 26 9.3
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 620 AAPXPXXXPXAAPXGXPPXXXXXPPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXX 799
+AP P +P PP PP P P P A P P P
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKV 201
Query: 800 PXPP 811
P PP
Sbjct: 202 PPPP 205
Score = 31.1 bits (67), Expect = 0.25
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +3
Query: 582 GGGPPXXPXGXGGPPXXXXGXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPX 761
GG P G P PP P PPP P P
Sbjct: 107 GGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSP-ASAPPIPSKAP 165
Query: 762 PXPXXXPPPRARXXXPXAXPP 824
P P PPP A+ P PP
Sbjct: 166 PIPSSLPPP-AQPAAPVKSPP 185
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 715 PPPPRXPXXPXPPRXXPXRXXXPPPGXXXXXPXPXXXXXXXPAXXXPXXXPXXXXAXPXX 894
P PP PP P R PPP P P P+ P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP-SKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 895 A 897
A
Sbjct: 187 A 187
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/80 (21%), Positives = 18/80 (22%)
Frame = +3
Query: 591 PPXXPXGXGGPPXXXXGXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXP 770
P P P P P PPP + P P P P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 771 XXXPPPRARXXXPXAXPPXG 830
P PP G
Sbjct: 207 SQAPVANTSSRPSSFAPPAG 226
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.027
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -3
Query: 891 PXGXGXXXXXXXXAXXXGXXXXXXGGPGGXGXXPGGGXXRPGXXXAXXGGXXRXXXGXGA 712
P G G G GGPGG PGG PG GG G G
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Query: 711 GXXXXXG 691
G G
Sbjct: 264 GPGGHGG 270
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 819 GGPGGXGXXPGGGXXRPGXXXAXXGGXXRXXXGXGAGXXXXXGGXXXXXG 670
GG GG G PGG PG GG G G G GG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 32.7 bits (71), Expect = 0.081
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = -1
Query: 815 GXGXXXXXPGG----GXXXRXGXXRGGXGXXGXRGGGGRXXXXPXXGXPXXXGGXPXGRP 648
G G PGG G G GG G G GG G P GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 647 GGPXXAXGRP 618
GGP G P
Sbjct: 256 GGPGGFGGGP 265
Score = 31.9 bits (69), Expect = 0.14
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -1
Query: 785 GGXXXRXGXXRGGX--GXXGXRGGGGRXXXXPXXGXPXXXGGXPXGRPGGPXXAXGRPPR 612
GG G GG G G G GG G GG P G GGP G P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 611 XXGXXRGXPPXXGG 570
G G GG
Sbjct: 247 FGGGLGGFGGGPGG 260
Score = 30.7 bits (66), Expect = 0.33
Identities = 26/82 (31%), Positives = 26/82 (31%)
Frame = -1
Query: 815 GXGXXXXXPGGGXXXRXGXXRGGXGXXGXRGGGGRXXXXPXXGXPXXXGGXPXGRPGGPX 636
G G PG G G G G GG G G P GG P G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG-FEGGPGGFGGGPGGFGGGLG 252
Query: 635 XAXGRPPRXXGXXRGXPPXXGG 570
G P G G P GG
Sbjct: 253 GFGGGP----GGFGGGPGGHGG 270
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 785 GGXXXRXGXXRGGXGXXGXRGGGGRXXXXPXXGXPXXXGGXPXGRPGGP 639
GG G GG G G GG G P GG P G GGP
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGH-GGP 271
Score = 27.5 bits (58), Expect = 3.1
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = -2
Query: 724 GXGGGXXXXRGXXXXXXGGGXPRGGXGXPXXXXGGPPXPXGXXGGPPPXXXGXPXPXPXX 545
G GG G GG GG G GG G GG P G P
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG----HGGFGGGPGGFEGGPGGFGGG 243
Query: 544 XGAPGXXXRXXGXGPPSXAXXXXXXXGP 461
G G G GP GP
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -3
Query: 819 GGPGGXGXXPGGGXXRPGXXXAXXGGXXRXXXGXGAGXXXXXGGXXXXXGGXPXG 655
GG G GG PG GG G G G GG GG P G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG-LGGFGGGPGGFGGGPGG 267
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 GXGXGXPXXXGGGPPXXPXGXGG 620
G G G GGPP P G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG 209
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 2/84 (2%)
Frame = +3
Query: 429 GXGGXXXXGXGGPXXXXXXXAXLGGPXPXXRXXXPGAPXXXGXGX--GXPXXXGGGPPXX 602
G G G GGP GG G G G P GGGP
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 603 PXGXGGPPXXXXGXPXPPRGXPPP 674
G GG G P G P
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 26.2 bits (55), Expect = 7.1
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 387 PRPGGGXXXVXXARGXGGXXXXGXGGPXXXXXXXAXLGGPXPXXRXXXPGAPXXXGXGXG 566
P PG G G G G GG GGP G P G G G
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGPGGFG-----GGPGGFGGGLG 252
Query: 567 XPXXXGGGPPXXPXGXGGP 623
GG P G GGP
Sbjct: 253 GFGGGPGGFGGGPGGHGGP 271
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.035
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 626 PXPXXXPXAAPXGXPPXXXXXPPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPX 805
P P P +AP PP P P P PP A PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP- 476
Query: 806 PPGP 817
PP P
Sbjct: 477 PPAP 480
Score = 29.9 bits (64), Expect = 0.57
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +1
Query: 592 PRXXPXXRG-GRPXAXXGPPGRPXGXPPXXXGXPXXGXXXXRPPPPRXPXXPXPPRXXPX 768
P P R G+P G PP G PP R P PPR P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL-PPQGRSAPPPPPPRSAPS 371
Query: 769 RXXXPPP 789
PPP
Sbjct: 372 TGRQPPP 378
Score = 29.5 bits (63), Expect = 0.76
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 3/115 (2%)
Frame = +3
Query: 519 RXXXPGAPXXXGXGXGXPXXXGGGPPXXPXGXGGPPXXXXGX-PXPPRG--XPPPXXXXX 689
R P P G P G P P G P PP+G PPP
Sbjct: 310 RPPPPPPPSRRNRGK-PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 690 XPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRARXXXPXAXPPXGXXXRXXXP 854
P PPP P PPP A PP G R P
Sbjct: 369 APSTGRQPPPLSSSRAVSNP--------PAPPPAIPGRSAPALPPLGNASRTSTP 415
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = -3
Query: 567 PXPPXPXXXGRRGXXGXXXGXXPQAXRPPPGXXAXXLXPPXXXPLXRGPGXPXXXPPRGG 388
P PP P RG G + PPP P +G P PPR
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRSA 369
Query: 387 -EXGXXPP 367
G PP
Sbjct: 370 PSTGRQPP 377
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -3
Query: 663 PXGAAXGXXXGXGAAPPXPXXXPGXPPRRXXXP-XPPXP 550
P A G AAPP P P PP P PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 26.2 bits (55), Expect = 7.1
Identities = 25/99 (25%), Positives = 25/99 (25%), Gaps = 5/99 (5%)
Frame = +1
Query: 631 AXXGPPGRPXGXPPXXX-GXPXXGXXXXR--PPPPRXPXXPX--PPRXXPXRXXXPPPGX 795
A PP P P P G PP P P P PP P P G
Sbjct: 384 AVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA 443
Query: 796 XXXXPXPXXXXXXXPAXXXPXXXPXXXXAXPXXAXAXXP 912
P P P P A P A P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/81 (23%), Positives = 20/81 (24%), Gaps = 1/81 (1%)
Frame = +3
Query: 585 GGPPXXPXGXGGPPXXXX-GXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPX 761
G P P G PP P R PP PP P P
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 762 PXPXXXPPPRARXXXPXAXPP 824
PP P + PP
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPP 429
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +2
Query: 632 PXXXPXAAPXGXPPXXXXXPPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPXPP 811
P P + P PP P AP P G PP P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP-LPPAAP 474
Query: 812 GPPXXXXXXP 841
PP P
Sbjct: 475 APPPAPAPAP 484
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 621 APPXPXXXPGXPPRRXXXPXPP 556
APP P P PP P PP
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 633 GXGAAPPXPXXXPGXPPRRXXXPXPP 556
G AAPP P P PP P P
Sbjct: 462 GMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.035
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 8/115 (6%)
Frame = +3
Query: 504 PXPXXRXXXPGAPXXXGXGXGXPXXXGGGPPXXPXGXGGPPXXXXGXPXPPRGXPPPXXX 683
P P P P G P PP P G PP PP P P
Sbjct: 1103 PVPKPSVAVPPVPAPSG-APPVPKPSVAAPPV-PVPSGAPPVPKPSVAAPP--VPAPSGA 1158
Query: 684 XXXPRXXXXPPPXPXXXXXXXP-------XXPXPXPXXXPP-PRARXXXPXAXPP 824
P+ PP P P P P P PP P+ P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 31.5 bits (68), Expect = 0.19
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = -2
Query: 661 PRGGXGXPXXXXGGPPXPXGXXGGPPPXXXGXPXPXPXXXGAPGXXXRXXGXGPPSXAXX 482
P G P PP P P P P P GAP + PP A
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPS 1175
Query: 481 XXXXXGPPXPXXXXPPXPRAXXTXXXPPPGRG 386
P P PP P P P G
Sbjct: 1176 SGIPP-VPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 28.7 bits (61), Expect = 1.3
Identities = 27/109 (24%), Positives = 28/109 (25%)
Frame = +3
Query: 504 PXPXXRXXXPGAPXXXGXGXGXPXXXGGGPPXXPXGXGGPPXXXXGXPXPPRGXPPPXXX 683
P P P P G P PP P G PP PP P
Sbjct: 1122 PVPKPSVAAPPVPVPSG-APPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPP-VPAPSSGI 1178
Query: 684 XXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRARXXXPXAXPPXG 830
P+ PP P P P P P P P P G
Sbjct: 1179 PPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 27.9 bits (59), Expect = 2.3
Identities = 23/87 (26%), Positives = 23/87 (26%)
Frame = +3
Query: 504 PXPXXRXXXPGAPXXXGXGXGXPXXXGGGPPXXPXGXGGPPXXXXGXPXPPRGXPPPXXX 683
P P P P P G PP P PP PP PPP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-SEAPPVPKPSVGVPP--VPPPSTA 1216
Query: 684 XXXPRXXXXPPPXPXXXXXXXPXXPXP 764
P PP P P P P
Sbjct: 1217 PPVPTPSAGLPPVP-VPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/82 (23%), Positives = 20/82 (24%)
Frame = +1
Query: 643 PPGRPXGXPPXXXGXPXXGXXXXRPPPPRXPXXPXPPRXXPXRXXXPPPGXXXXXPXPXX 822
P G P P P PP P P P+ P P P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV 1147
Query: 823 XXXXXPAXXXPXXXPXXXXAXP 888
PA P A P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAP 1169
Score = 26.6 bits (56), Expect = 5.3
Identities = 22/114 (19%), Positives = 24/114 (21%)
Frame = +3
Query: 489 AXLGGPXPXXRXXXPGAPXXXGXGXGXPXXXGGGPPXXPXGXGGPPXXXXGXPXPPRGXP 668
A L P + P P P P PP P P
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Query: 669 PPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRARXXXPXAXPPXG 830
P P P P P P P P+ P P G
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Score = 26.2 bits (55), Expect = 7.1
Identities = 25/107 (23%), Positives = 25/107 (23%), Gaps = 1/107 (0%)
Frame = +3
Query: 504 PXPXXRXXXPGAPXXXGXGXGXPXXXGGG-PPXXPXGXGGPPXXXXGXPXPPRGXPPPXX 680
P P P P G P G PP PP PP P
Sbjct: 1065 PVPAPSSEIPSIPAPSG---APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 681 XXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRARXXXPXAXP 821
P P P P P P P P P P P
Sbjct: 1122 PVPKPSVAAPPVPVP----SGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.2 bits (55), Expect = 7.1
Identities = 21/80 (26%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Frame = +2
Query: 617 GAAPXPXXXPXAAPXGXPPXXXXXPPXXXXXPAPXPXXXRXXP-PXXAXXXPGRXXPPPG 793
GA P P A P P P P P P P + P PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP--PVPPPS 1214
Query: 794 XXPXPPGPPXXXXXXPXXXA 853
P P P P A
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTA 1234
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +2
Query: 689 PPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPP---GXXPXPPGPP 820
PP P P P PP P PPP G P PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.57
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 621 PPXXXXGXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPR 791
PP G P PP PPP P PPP P P P P P+
Sbjct: 753 PPAPIMGGPPPP--PPPPGVAGAGP---PPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +3
Query: 621 PPXXXXGXPXP-PRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRAR 797
PP P P P PPP P PPP P P P P P +R
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGP----PPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 798 XXXP 809
P
Sbjct: 792 YYAP 795
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +2
Query: 653 APXGXPPXXXXXPPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPXPPGPP 820
+P PP P P P P PP P G P PP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 949 GXAPPXPPXXGXXGXXPXPP 890
G PP PP G G P PP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 657 RGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPPRARXXXPXAXPP 824
+ PPP P P P P P P P PP A P PP
Sbjct: 730 KSPPPPPPAVIVPT----PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = -2
Query: 589 PPPXXXGXPXPXPXXXGAPGXXXRXXGXGPPSXAXXXXXXXGPPXPXXXXPPXPRAXXTX 410
PPP P P P P G PP GPP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 409 XXPPP 395
P P
Sbjct: 793 YAPAP 797
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 570 PXXXGGGPPXXPXGXGGPPXXXXGXPXPPRGXPPP 674
P GGPP P PP G PP PPP
Sbjct: 754 PAPIMGGPPPPP-----PPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +3
Query: 651 PPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPP 788
PP P P PPP P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +3
Query: 591 PPXXPXGXGGPPXXXXGXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXP 764
PP P P P PP PPP P PP P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP-PPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 668 PPXXXXXPPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPXPPGPP 820
P PP AP P PP P PPP P P GPP
Sbjct: 1683 PAHPVSTPPVRPQSAAP-PQMSAPTPPPPPMSVP----PPPSAPPMPAGPP 1728
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +3
Query: 609 GXGGPPXXXXGXPXPPRGXPPPXXXXXXPRXXXXPPPXPXXXXXXXPXXPXPXPXXXPPP 788
G P P P+ PP P PPP P P P PPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTP----PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Query: 789 RARXXXPXAXPP 824
P P
Sbjct: 1735 LPASSAPSVPNP 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.76
Identities = 23/66 (34%), Positives = 24/66 (36%)
Frame = +2
Query: 425 PRXRGXXXGGXRXXAXXPGGGRXAWGXXPXXXPXXPRRPXXXGXGGXGSXXRRGGXPGXX 604
P RG GG R GGR +G R G GG G RGG G
Sbjct: 5 PGSRGGR-GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA--RGGRGGSS 61
Query: 605 XGXGGA 622
G GGA
Sbjct: 62 GGRGGA 67
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -1
Query: 788 GGGXXXRXGXXRGGXGXXGXRG---GGGRXXXXPXXGXPXXXGGXPXGRPGGPXXAXG 624
GG R G G G G RG GGGR G G G GG A G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 26.6 bits (56), Expect = 5.3
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = -2
Query: 790 RGG--GXXXGXGXGXXGXXXXXXXGXGGGXXXXRGXXXXXXGGGXPRGGXGXPXXXXGG 620
RGG G G G G GGG RG G G RGG G GG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG---GRGGRGGARGGRGGSSGGRGG 66
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Frame = +1
Query: 586 GXPRXXPXXRG----GRPXAXXGPPGRPXGXPPXXXGXPXXGXXXXRPPPPRXPXXPXPP 753
G P P RG G A G P G P P G PPPP PP
Sbjct: 82 GPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPP 141
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 718 PPPRXPXXPXPPRXXPXRXXXPPP 789
PP P P PP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -1
Query: 764 GXXRGGXGXXGXRGG-GGRXXXXPXXGXPXXXGGXPXGRP 648
G RGG G G RGG GGR G GG G P
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGF--GGGRGRGRGGARSGNP 484
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -2
Query: 820 GXAXGXXXRARGGGXXXGXGXGXXGXXXXXXXGXGGGXXXXRGXXXXXXGGGXPRGG 650
G G R GG G G G G GGG G G RGG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 645 PXPPRGXPPPXXXXXXPRXXXXPPP 719
P PP G PPP PPP
Sbjct: 278 PFPPEGSPPPMPIELLSYIINMPPP 302
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,913,253
Number of Sequences: 5004
Number of extensions: 30505
Number of successful extensions: 259
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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