Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I09
         (980 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.34 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.34
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +2

Query: 608 GXGGAAPXPXXXPXAAPXGXPPXXXXXPPXXXXXPAP 718
           G  G  P P   P A   G PP     PP      AP
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/41 (26%), Positives = 13/41 (31%)
 Frame = +2

Query: 689 PPXXXXXPAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPXPP 811
           P      P P P      P   +   P +  PP G    PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/37 (29%), Positives = 11/37 (29%)
 Frame = +3

Query: 585 GGPPXXPXGXGGPPXXXXGXPXPPRGXPPPXXXXXXP 695
           G P   P     P     G P  P   PPP      P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 14/51 (27%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
 Frame = +1

Query: 625 PXAXXGPPGRPXGXPPXXXGXPXXGXXXXRPPPPR--XPXXPXPPRXXPXR 771
           P +  GPP      PP   G P       +   PR   P     PR    R
Sbjct: 124 PESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSR 174


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 11/36 (30%), Positives = 12/36 (33%)
 Frame = +2

Query: 710 PAPXPXXXRXXPPXXAXXXPGRXXPPPGXXPXPPGP 817
           P P P   R      +   PG   P     P PP P
Sbjct: 79  PQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHP 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,219
Number of Sequences: 438
Number of extensions: 8225
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32411652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)