Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I06
         (1240 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0DLG0 Cluster: Os05g0104000 protein; n=9; Oryza sativa...    36   2.2  
UniRef50_Q0IZF3 Cluster: Os09g0572500 protein; n=2; Oryza sativa...    36   2.9  
UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|R...    34   8.7  

>UniRef50_Q0DLG0 Cluster: Os05g0104000 protein; n=9; Oryza sativa|Rep:
            Os05g0104000 protein - Oryza sativa subsp. japonica
            (Rice)
          Length = 830

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
 Frame = +3

Query: 723  CSXXXXXPXXXHHHYSXPN-TXRAAIXGXXSPPXXPXXSXXIPTSSXPSXPXXL--PRKX 893
            CS         HH  S P  T    +    SPP  P  +  + T + P  P     PR+ 
Sbjct: 32   CSAVSVPNNNTHHRSSSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRH 91

Query: 894  XRXSXPLXRXAAVXXXPSXVXXXVVXPXPXXPPXPAXTPP 1013
             R   P          P         P P  PP PA  PP
Sbjct: 92   HRIPPPPPPLLPTPPPPPASISPT--PAPPLPPPPAPAPP 129


>UniRef50_Q0IZF3 Cluster: Os09g0572500 protein; n=2; Oryza sativa
            (japonica cultivar-group)|Rep: Os09g0572500 protein -
            Oryza sativa subsp. japonica (Rice)
          Length = 541

 Score = 35.5 bits (78), Expect = 2.9
 Identities = 29/107 (27%), Positives = 33/107 (30%)
 Frame = +3

Query: 813  PPXXPXXSXXIPTSSXPSXPXXLPRKXXRXSXPLXRXAAVXXXPSXVXXXVVXPXPXXPP 992
            PP     S  I +SS  S P   P      S P     A    P+        P    PP
Sbjct: 338  PPGRSSTSSTISSSSASSSPTSSPSPSTASSSP----PASSPAPTTSASPSTSPSTSPPP 393

Query: 993  XPAXTPPAXXX*XXSGSXSXSSXXXCAXXPPXXMTXXXXHXPXXQFG 1133
             P+ TPPA      S S   SS   C    P   +      P    G
Sbjct: 394  SPSSTPPAPRAPAISSSSGSSSRTSCPCTGPRPRSSACSRPPAPTSG 440


>UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|Rep:
            Diaphanous homologue - Gallus gallus (Chicken)
          Length = 1253

 Score = 33.9 bits (74), Expect = 8.7
 Identities = 21/80 (26%), Positives = 28/80 (35%)
 Frame = +3

Query: 774  PNTXRAAIXGXXSPPXXPXXSXXIPTSSXPSXPXXLPRKXXRXSXPLXRXAAVXXXPSXV 953
            P++  + + G   PP  P  S  +     P  P          + PL   AA+   P   
Sbjct: 545  PSSAASLLPGGTVPPSPPALSSGVVPLPPPPPPPLPGGAAIPPAPPLPGGAAIPPAPPLP 604

Query: 954  XXXVVXPXPXXPPXPAXTPP 1013
               VV P P  P   A  PP
Sbjct: 605  GGTVVPPAPPLPGGAAVIPP 624


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,809,735
Number of Sequences: 1657284
Number of extensions: 2913207
Number of successful extensions: 7761
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7192
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125125458531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)