Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I06
         (1240 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    36   0.066
11_01_0066 - 536281-537196,537397-537452                               31   1.9  
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    31   1.9  

>05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 35.9 bits (79), Expect = 0.066
 Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
 Frame = +3

Query: 723  CSXXXXXPXXXHHHYSXPN-TXRAAIXGXXSPPXXPXXSXXIPTSSXPSXPXXL--PRKX 893
            CS         HH  S P  T    +    SPP  P  +  + T + P  P     PR+ 
Sbjct: 26   CSAVSVPNNNTHHRSSSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRH 85

Query: 894  XRXSXPLXRXAAVXXXPSXVXXXVVXPXPXXPPXPAXTPP 1013
             R   P          P         P P  PP PA  PP
Sbjct: 86   HRIPPPPPPLLPTPPPPPASISPT--PAPPLPPPPAPAPP 123


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 19/68 (27%), Positives = 24/68 (35%)
 Frame = +3

Query: 810  SPPXXPXXSXXIPTSSXPSXPXXLPRKXXRXSXPLXRXAAVXXXPSXVXXXVVXPXPXXP 989
            +PP  P  S   P+++ P  P   P        P     A    P  +    V P P  P
Sbjct: 222  TPPPSPA-SPPPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPPPPLPRATVTPTPTTP 280

Query: 990  PXPAXTPP 1013
            P  A T P
Sbjct: 281  PSTATTTP 288


>01_03_0117 + 12684729-12685886,12685978-12686145,12686292-12686336,
            12686438-12687280
          Length = 737

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 26/86 (30%), Positives = 28/86 (32%)
 Frame = +3

Query: 756  HHHYSXPNTXRAAIXGXXSPPXXPXXSXXIPTSSXPSXPXXLPRKXXRXSXPLXRXAAVX 935
            HHH   P+   A       PP         P  S    P   P K      P    AA+ 
Sbjct: 187  HHHAKPPSLPPA------EPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMP 240

Query: 936  XXPSXVXXXVVXPXPXXPPXPAXTPP 1013
              PS      V P P  PP PA  PP
Sbjct: 241  KPPSVAP---VQP-PQRPPAPATKPP 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,985,511
Number of Sequences: 37544
Number of extensions: 110587
Number of successful extensions: 469
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3817805856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)