Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I04
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 552 SINLMFYVRGNKADYDEWAADGNEGWSFEDVLPYFKKSXSFMGKFDAEATKYHSXGGYLS 731
           SIN +     +KAD   +A     G++    LP    S S +G     +  YH+  G  S
Sbjct: 371 SINRLLPTAESKADIKMYADMHQYGYNTLSPLPSSVHSHSTIGNDYYNSPLYHTSAGTTS 430

Query: 732 V 734
           +
Sbjct: 431 L 431


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/40 (22%), Positives = 16/40 (40%)
 Frame = +3

Query: 513  CAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWS 632
            C WP      G+S++N++  V   K      +      W+
Sbjct: 1320 CDWPEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWN 1359


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 206 YIPGCAMCD 232
           Y+PGCAM D
Sbjct: 382 YLPGCAMVD 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,286
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)