Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I04
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    87   2e-17
AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
 Frame = +3

Query: 339 NRLSEISDWKVLLVEAGG-NPTLATEIPQP---YYSNMGTSEDWAYHTEPQEGACRAYKN 506
           NRL+E    +VLL+EAG  +      I  P    Y+    + +W YHT  Q+       N
Sbjct: 54  NRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKNL----GN 109

Query: 507 KGCAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEDVLPYFKKSXSFMGKF 686
           +   WPRG+V GGSS++N M YVRG+  DY+ W  +G  GW++ + LPYFKK+ ++    
Sbjct: 110 RVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETY-SDA 168

Query: 687 DAEATKYHSXGGYLSVXSDDNMHEIXXLIIKAAVXLXLXNLTDCXGDXXIGVMXSFPTXK 866
                 Y    G L V   D  + +    +       L    D  G+   G+     T  
Sbjct: 169 TGPNDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTNDMNGEKQEGISTMDMTIH 228

Query: 867 GG 872
            G
Sbjct: 229 NG 230


>AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical
           protein F49F1.11 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 435 NMGTSEDWAYH--TEPQEGACRAYKNKGCAWPRGKVLGGS 548
           N+  S+ W +H  +EP +G     ++   AW  G+  GG+
Sbjct: 129 NLAKSKVWVFHFASEPTKGLVARTRHTNGAWEVGETYGGN 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,748
Number of Sequences: 27780
Number of extensions: 317072
Number of successful extensions: 811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)