Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_I03
(884 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 64 1e-10
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 62 4e-10
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 54 1e-07
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 39 0.006
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 33 0.30
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.93
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 31 1.2
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 30 2.8
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 29 3.8
09_04_0160 + 15226762-15227032,15227138-15227373,15227469-152275... 29 5.0
06_03_1172 - 28147957-28148274,28149362-28149877 29 5.0
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 5.0
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 29 6.6
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 8.7
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/63 (49%), Positives = 38/63 (60%)
Frame = +1
Query: 649 PILVXCLSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDP 828
P + L R D P LQF AWALT IASGTS T V +GA P+ + L SP + VR+
Sbjct: 124 PRFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQ 183
Query: 829 ALW 837
A+W
Sbjct: 184 AVW 186
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 525 VMNAANAENPEAQLAAVQQCRKLLSCDXNPPIDELIAAGILP 650
++ A +++ QL A Q RKLLS + +PPI+E+I G++P
Sbjct: 83 MVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVP 124
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +2
Query: 314 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 448
+++A+ R +K A D DE RRRR + VE+RK++REE+L K+R
Sbjct: 6 SERAEVRRSRYKVA-VDADEGRRRREDNMVEIRKSRREESLLKKR 49
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +1
Query: 649 PILVXCLSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDP 828
P V L+R D P LQF AWALT IASGTS T V GA P+ + L S D VR+
Sbjct: 118 PRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQ 177
Query: 829 ALW 837
A+W
Sbjct: 178 AVW 180
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 543 AENPEAQLAAVQQCRKLLSCDXNPPIDELIAAGILP 650
+++ QL A Q RKLLS + +PPI+E+I +G++P
Sbjct: 83 SDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVP 118
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +2
Query: 332 RMHVFKNAGK---DVDEMRRRRNEVTVELRKNKREETLQKRR 448
R+ V +N K D +E RRRR + VE+RK++REE+L K+R
Sbjct: 8 RVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKR 49
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 649 PILVXCLSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDP 828
P L + D L WAL+ ++ GT+ + V AG P + L P V P
Sbjct: 245 PALARLIHSNDEEVLT-DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIP 303
Query: 829 AL 834
AL
Sbjct: 304 AL 305
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1
Query: 649 PILVXCLSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDP 828
P V L+R + P LQF AWALT IASGT+A T V GA P+ + L SP R+
Sbjct: 121 PRFVEFLTREEYPQLQFEAAWALTNIASGTAANTMAVIEHGAVPIFVKLLSSP----RED 176
Query: 829 ALW 837
A+W
Sbjct: 177 AVW 179
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 522 LVMNAANAENPEAQLAAVQQCRKLLSCDXNPPIDELIAAGILP 650
+++ +++ QL + Q RKLLS D PPIDE+I +G+LP
Sbjct: 79 MMVQGLYSDDSSMQLESTTQFRKLLSVDHCPPIDEVIRSGVLP 121
Score = 35.1 bits (77), Expect = 0.075
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 353 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE 478
A D E RRRR ++TV LRK R+ L+++R P + + E
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAE 59
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +1
Query: 667 LSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDPALW 837
LSR ++P LQ AW LT IA+ S T V GA P + L S + +R A+W
Sbjct: 163 LSRHEHPQLQMEAAWVLTNIAA--SDYTLLVAECGAVPRLVELLESANANIRHQAIW 217
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 543 AENPEAQLAAVQQCRKLLSCDXNPPIDELIAAGILP 650
+++ +QL A Q R+LLS + NP + ++I A +LP
Sbjct: 122 SDDTTSQLEATIQFRRLLSDEKNPTVIKIIRADVLP 157
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 655 LVXCLSRADNPXLQFXTAWALTXIASGTSAQTNXVXXAGAAPVSLXPLXSPHDPVRDPAL 834
L+ CL ++DN L+ ++WAL+ IA+G+ + + A PV + + S +R A
Sbjct: 335 LIKCL-KSDNRVLRKESSWALSNIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAA 393
Query: 835 W 837
+
Sbjct: 394 Y 394
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 389 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 490
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 278 YCVETASTDKMATDQAKNRMHVFKNAGKDVDE-MRRRRNEVTVELRKNKREETLQKRRNV 454
YC +++ + A +A+ K+ K + E + + EV + R++++ E +K+RN+
Sbjct: 352 YCSDSSFSG--AEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNI 409
Query: 455 PISYSTDEEEID 490
S S+ + E+D
Sbjct: 410 TESESSSDSEVD 421
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 308 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 487
M T+ AK + +V K++ VD + ++++N R+ + +VP S ++ E++
Sbjct: 259 METESAKLKRNVRKSSAVTVDSFQTNMTVEPEKIKRNSRKFSSSAADSVPDSQLSELEKV 318
Query: 488 DKNL 499
+NL
Sbjct: 319 KRNL 322
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +2
Query: 284 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 463
+E A + +A + + + + A +EM+ +R T + ++ K+++ QK+ N +
Sbjct: 442 IEVAYQEAVALKRQEELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVK 501
Query: 464 YSTDEEEIDKN 496
EE+ D N
Sbjct: 502 DKDREEKCDSN 512
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 352 ILEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGL 179
++EH V L + + IC R LD R YT N+ L S++I + DG +
Sbjct: 275 LIEHTDVVVLLDNEAIYDICKRSLDIERPTYT-----NLNRLISQVISSLTTSLRFDGAI 329
Query: 178 TSIFTKYSTILIKDGPFP 125
T++ T L+ P+P
Sbjct: 330 NVDITEFQTNLV---PYP 344
>09_04_0160 +
15226762-15227032,15227138-15227373,15227469-15227565,
15227657-15227783,15227870-15228482,15228572-15228835,
15228918-15229130,15229253-15229460,15229552-15229748,
15229830-15230183,15230287-15230874
Length = 1055
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 712 PKRSRTVTXDCQPSKGTEL---GWGSIPAAMSSSIGGXLSHESSFLHCCTAANCASGFSA 542
PKR + VT DC P G + G +P A+++ GG S + + + N F
Sbjct: 642 PKRPKMVTCDCCPCFGRKKRKHGKDGLPEAVAAD-GGMDSDKEMLM---SQMNFEKRFGQ 697
Query: 541 LAAFITSS 518
AAF+TS+
Sbjct: 698 SAAFVTST 705
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = +2
Query: 767 PXQP-LYPFXPXCXXMTP----YVIRPYGPPAXIIGXRPXPS 877
P P +YPF P + P PY PP+ II P PS
Sbjct: 16 PSPPSVYPFLPPATFIPPPPPAATAEPYAPPSLIISPPPSPS 57
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 347 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 484
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 352 ILEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGL 179
+LEH L + + IC R LD R YT N+ L S++I + DG +
Sbjct: 194 LLEHTDVAVLLDNEAIYDICRRSLDIERPTYT-----NLNRLISQIISSLTTSLRFDGAI 248
Query: 178 TSIFTKYSTILIKDGPFP 125
T++ T L+ P+P
Sbjct: 249 NVDVTEFQTNLV---PYP 263
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 368 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA-TTDLX*AGDER 535
+E RRR+ + + R ++ LQK++ + S DEEE++ N DL D R
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMNRGDNADLKGDNDSR 495
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,003,483
Number of Sequences: 37544
Number of extensions: 418312
Number of successful extensions: 1138
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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