Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_I03
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    27   0.23 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.9  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 368 DEMRRRRNEVT-VELRKNKREETLQKRRNVPISYSTDEEEIDK 493
           ++ ++ RNE   ++LR   +EE LQ RR   +     E+E +K
Sbjct: 13  EKFKQLRNEDNKIDLRSRTKEERLQYRREAWLVQQEREQEYEK 55


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 108 IKRFLEGNGPSFMSIVEYFVKIEVKP 185
           +KRFL+   P   +++ YF  I   P
Sbjct: 818 LKRFLDITTPPTPNLLRYFASIATNP 843


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  LHLLXGXPXKIFXVWQH 73
           L L+ G P +I+ +W H
Sbjct: 101 LLLISGLPPEIYYIWSH 117


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 22/73 (30%), Positives = 29/73 (39%)
 Frame = -1

Query: 821 RTGSXGDXKGXRDTGAAPAXXTXLVXADVPEAMXVKAQAVXNCNXGLSALERHXTRMGEY 642
           RT S GD  G +         T  + AD PE +          N  +S+L+   TR  + 
Sbjct: 281 RTLSKGDFFGEKAL-QGDDLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDS 339

Query: 641 SSSYELINRRVXI 603
           SSS E    R  I
Sbjct: 340 SSSVEGWENRATI 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,238
Number of Sequences: 438
Number of extensions: 4426
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)