Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H23
         (916 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.27 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.27 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.27 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   1.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   4.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   4.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +1

Query: 757 PPXPXXPPHPPXXXXXPXXPPPXP 828
           PP P   PHPP     P    P P
Sbjct: 231 PPHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +1

Query: 757 PPXPXXPPHPPXXXXXPXXPPPXP 828
           PP P   PHPP     P    P P
Sbjct: 123 PPHPGLSPHPPHLSSHPAIVTPGP 146


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = +3

Query: 777 PPPPXXXPXPPXPPXXPPXPXXPPPXXXPXXPXPPXPXPPXXXP 908
           P P    P P  PP        PP    P  P PP   P    P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 25.4 bits (53), Expect = 0.62
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = +3

Query: 714 PXPPPXXPXPXPXPPPXXPXPPPPPXXXPXPPXPPXXPPXPXXP 845
           P P    P P   P        PP    P  P PP  PP    P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/48 (29%), Positives = 14/48 (29%)
 Frame = +3

Query: 735 PXPXPXPPPXXPXPPPPPXXXPXPPXPPXXPPXPXXPPPXXXPXXPXP 878
           P   P P    P P  PP        PP     P   PP   P    P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = +3

Query: 684 PLPAXXTXXPPXPPPXXPXPXPXPPPXXPXPPPPPXXXP 800
           P P+     P  PP         P P  P  P PP   P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +1

Query: 724 PXXXPPXXXPPPPXPXXPPHPPXXXXXPXXPPPXPPPPXXXP 849
           P    P    PP       +PP     P   PP  PP    P
Sbjct: 155 PSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/38 (31%), Positives = 12/38 (31%)
 Frame = +1

Query: 724 PXXXPPXXXPPPPXPXXPPHPPXXXXXPXXPPPXPPPP 837
           P   PP    P P    P         P  PP   PPP
Sbjct: 68  PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
 Frame = +3

Query: 684 PLPAXXTXXPPXPP--PXXPXPXPXPPPXXPXP 776
           PLP+  T  P   P  P  P P P   P    P
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEP 103



 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +2

Query: 821 PPPXPPTXXPXPXXPXPXPPXPXPXXXP 904
           P P   T  P P    P  P P P   P
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASP 98


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 149 YRNXXPPTEQNKNQSENKTFXXRFH 75
           Y N   P E+ K Q  NK    +FH
Sbjct: 9   YNNDFYPIEKTKAQLANKELWDQFH 33


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 854 GGGXXXGGGGXGGGXXGXXXXXGG 783
           G      GGG GGG  G     GG
Sbjct: 85  GENNDDSGGGRGGGRDGDRGDGGG 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 240 KRHLNRAXCQIAGXS*SFNHPLIFTEVRIVISK 142
           KRH  R  C +     +    ++F+E+ +++S+
Sbjct: 127 KRHKKRLLCYLLARYVALALVILFSEILVIVSE 159


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 240 KRHLNRAXCQIAGXS*SFNHPLIFTEVRIVISK 142
           KRH  R  C +     +    ++F+E+ +++S+
Sbjct: 145 KRHKKRLLCYLLARYVALALVILFSEILVIVSE 177


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = +3

Query: 684 PLPAXXTXXPPXPPPXXPXPXPXPPPXXPXPPPPPXXXP 800
           P P+     P  PP         P P  P  P PP   P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,573
Number of Sequences: 336
Number of extensions: 5162
Number of successful extensions: 32
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)