Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H21
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 29 0.93
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.93
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.93
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.9
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.043
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +2
Query: 722 PXIXPXXXXPPXXXNXAPXPXPXP---PPXPPXPXXPXXXXXXPPXPXP 859
P + P PP AP P P P PP P P P PP P P
Sbjct: 1690 PPVRPQSAAPPQMS--APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 664 PXFTPPXXXVXXFSXXHPXXXDXPXPXLXPXXPQXRPXPXATPXPXPPXXPPXXXP 831
P TPP P P P P P P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/85 (25%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +2
Query: 614 SNDVLXXNXXPXXXDXDXXLPXRXVXFXPSPXXTPXPXIXPXXXXPPXXXNXAPXPXPX- 790
S + + P D + + SP P I P P P P P
Sbjct: 702 SGSEISSSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIP---VPPPAPIM 758
Query: 791 --PPPXPPXPXXPXXXXXXPPXPXP 859
PPP PP P PP P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 749 PPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXPXXXXXXXPXXXXXP 901
PP P P P P P P P PP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/52 (26%), Positives = 15/52 (28%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXP 853
P+P P P PP P PPP PP P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXP 853
PS + P + P PP AP P PP P P P PP P
Sbjct: 421 PSLPPSAPPSLPPSA--PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/88 (26%), Positives = 25/88 (28%)
Frame = +3
Query: 651 PXTXTXXYPXAXXGSXLLPXPPPXXXSXXXXXXPPPPXTXPPSXRHXXPXXPXXPXXPXP 830
P P S P P S P P + PPS P P P P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP----P 451
Query: 831 XXXXLPPXHXXXXXXXXXPXSXXPAPPP 914
PP P + PAPPP
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPA-APAPPP 478
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
PS + P + P AP P P P P P PP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/68 (23%), Positives = 20/68 (29%)
Frame = +3
Query: 711 PPPXXXSXXXXXXPPPPXTXPPSXRHXXPXXPXXPXXPXPXXXXLPPXHXXXXXXXXXPX 890
PPP S PPP + + + P P P L P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 891 SXXPAPPP 914
S P+ PP
Sbjct: 422 SLPPSAPP 429
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 671 LPXRXVXFXPSPXXTPX-PXIXPXXXXPPXXXNXAPXPXPXPPPXPPXP 814
LP P P P P + P AP P P P P P P
Sbjct: 439 LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 29.1 bits (62), Expect = 0.93
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 770 APXPXPXPPPXPPXP 814
AP P P PPP PP P
Sbjct: 805 APPPAPLPPPAPPLP 819
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 2/69 (2%)
Frame = +3
Query: 711 PPPXXXSXXXXXXPPPPXTXPPSXRHXXPXXPXXP--XXPXPXXXXLPPXHXXXXXXXXX 884
PPP PPPP P P P P P P H
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 885 PXSXXPAPP 911
P P PP
Sbjct: 268 PGEHMPPPP 276
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 2/69 (2%)
Frame = +3
Query: 711 PPPXXXSXXXXXXPPPPXTXPPSXRHXXPXXPXXP--XXPXPXXXXLPPXHXXXXXXXXX 884
PPP PPPP P P P P P P H
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 885 PXSXXPAPP 911
P P PP
Sbjct: 307 PGEHMPPPP 315
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Frame = +2
Query: 716 PXPXIXPXXXXPPXXXNXAPXPXPXPPPXPP---XPXXPXXXXXXPPXPXP 859
P P PP P P PP PP P P PP P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
P P P P P + A P P P PP P PP P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP---VPKPSVAAPPVPAP 1174
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
P P P P P + A P P P PP P PP P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP---VPKPSVAAPPVPAP 1155
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
P P P P PP A P PP P P PP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP--SEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/77 (24%), Positives = 19/77 (24%), Gaps = 1/77 (1%)
Frame = +2
Query: 674 PXRXVXFXPSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPPXP-XXPXXXXXXPPX 850
P V P P P PP P P P PP P PP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 851 PXPXXXXXXXPXXXXXP 901
P P P P
Sbjct: 1067 PAPSSEIPSIPAPSGAP 1083
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/65 (26%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +1
Query: 733 PXPXLXPXXPQXR-PXPXATPXPXPPXXPPXXXPXXXXSXPXTXXXXXXXPXXXXPPXXX 909
P P L P P A P P P PP P P + P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 910 XPXXP 924
P P
Sbjct: 1073 IPSIP 1077
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 674 PXRXVXFXPSPXXTPXPXIXPXXXXPPXXX-NXAPXPXPXPPPXPPXPXXPXXXXXXPPX 850
P V P P P P P PP + AP P P P P P PP
Sbjct: 1184 PAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAP---PVPTPSAGLPPVPVPTAKAPPV 1239
Query: 851 PXP 859
P P
Sbjct: 1240 PAP 1242
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXX-NXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
P+P P P P PP + A P P P PP P PP P P
Sbjct: 1086 PAPSGIP-PVPKPSVAAPPVPKPSVAVPPVPAPSGAPP---VPKPSVAAPPVPVP 1136
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 749 PPXXXNXAPXPXPXPPPXPPXPXXPXXXXXXPPXPXP 859
PP P P PPP PP P P P P
Sbjct: 224 PPTYTPKQADPLPAPPP-PPPPTLPPQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +2
Query: 698 PSPXXTPXPXIXPXXXXPPXXXNXAPXPXPXPPPXPP 808
P+ +P P P P + P PPP PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 770 APXPXPXPPPXPPXPXXPXXXXXXPPXP 853
A P PPP PP P PP P
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/41 (31%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Frame = +2
Query: 734 PXXXXPPXXXNXAPX-PXPXPPPXPPXPXXPXXXXXXPPXP 853
P PP P P P PP P P PP P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +1
Query: 703 SXXHPXXXDXPXPXLXPXXPQXRPXPXATPXPXPPXXPPXXXPXXXXSXP 852
S P P P + P P P + P P PP P P
Sbjct: 135 SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,620,602
Number of Sequences: 5004
Number of extensions: 19459
Number of successful extensions: 220
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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