SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H18
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1 prot...   302   2e-82
X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.    302   2e-82
AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical...   302   2e-82
Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2 prot...   283   2e-76
AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical ...   283   2e-76
AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical...   281   6e-76
U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catal...   275   2e-74
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1
           protein.
          Length = 497

 Score =  302 bits (742), Expect = 2e-82
 Identities = 131/180 (72%), Positives = 153/180 (85%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDI+KY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
           P  FP+FIHTQKRNP THLKDP+M +D    RPE +HQ+++LF DRG+PDGYRHMNGYGS
Sbjct: 154 PIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGS 213



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 778 HTFKLVXSQGVGYWGTXHYKTXQGIK 855
           HTFK+V   G   +   H+K  QG+K
Sbjct: 214 HTFKMVNKDGKAIYVKFHFKPTQGVK 239


>X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.
          Length = 500

 Score =  302 bits (742), Expect = 2e-82
 Identities = 131/180 (72%), Positives = 153/180 (85%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDI+KY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
           P  FP+FIHTQKRNP THLKDP+M +D    RPE +HQ+++LF DRG+PDGYRHMNGYGS
Sbjct: 154 PIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGS 213



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 778 HTFKLVXSQGVGYWGTXHYKTXQGIK 855
           HTFK+V   G   +   H+K  QG+K
Sbjct: 214 HTFKMVNKDGKAIYVKFHFKPTQGVK 239


>AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical
           protein Y54G11A.5 protein.
          Length = 500

 Score =  302 bits (742), Expect = 2e-82
 Identities = 131/180 (72%), Positives = 153/180 (85%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDI+KY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
           P  FP+FIHTQKRNP THLKDP+M +D    RPE +HQ+++LF DRG+PDGYRHMNGYGS
Sbjct: 154 PIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGS 213



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 778 HTFKLVXSQGVGYWGTXHYKTXQGIK 855
           HTFK+V   G   +   H+K  QG+K
Sbjct: 214 HTFKMVNKDGKAIYVKFHFKPTQGVK 239


>Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2
           protein.
          Length = 497

 Score =  283 bits (693), Expect = 2e-76
 Identities = 124/180 (68%), Positives = 149/180 (82%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDITKY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDITKYCKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
              FP+FIH  KRNP TH++DP+  +D    RPE+IHQ+++L+ DRGIPDG+R MNGYG+
Sbjct: 154 AIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGA 213


>AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.6 protein.
          Length = 497

 Score =  283 bits (693), Expect = 2e-76
 Identities = 124/180 (68%), Positives = 149/180 (82%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDITKY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDITKYCKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
              FP+FIH  KRNP TH++DP+  +D    RPE+IHQ+++L+ DRGIPDG+R MNGYG+
Sbjct: 154 AIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGA 213


>AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical
           protein Y54G11A.13 protein.
          Length = 512

 Score =  281 bits (688), Expect = 6e-76
 Identities = 122/180 (67%), Positives = 148/180 (82%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QD+ ++DEM+ FDR RIPERVVHAKG GA GYFEVTHDITKY  A
Sbjct: 49  KTAVLTAGRRGPMLMQDIVYMDEMAHFDRERIPERVVHAKGGGAHGYFEVTHDITKYCKA 108

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIRD
Sbjct: 109 DMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRD 168

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
              FP+FIH  KRNP TH++DP+  +D    RPE+IHQ+++L+ DRGIPDG+R MNGYG+
Sbjct: 169 AIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGA 228


>U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catalase
           protein.
          Length = 496

 Score =  275 bits (675), Expect = 2e-74
 Identities = 123/180 (68%), Positives = 148/180 (82%)
 Frame = +2

Query: 239 KTAXQTVGKXGPALLQDVNFLDEMSSFDRXRIPERVVHAKGAGAFGYFEVTHDITKYSAA 418
           KTA  T G+ GP L+QDV ++DEM+ FDR RIPERVVHAKGAGA GYFEVTHDITKY  A
Sbjct: 34  KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDITKYGKA 93

Query: 419 KVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRD 598
            +F  +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIRD
Sbjct: 94  DMFHKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRD 153

Query: 599 PTLFPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGS 778
              FP+FIH  KRNP TH++DP+  +D    RPE+I Q+++L+ DRGIPDG+R MNGYG+
Sbjct: 154 AIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESI-QVMFLYSDRGIPDGFRFMNGYGA 212


>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
            R11A8.7d protein.
          Length = 1427

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
            R11A8.7c protein.
          Length = 1405

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 546  SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
            SS+ N T+ P+G+ T+S+ P+  P+  ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,912,528
Number of Sequences: 27780
Number of extensions: 373571
Number of successful extensions: 961
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -