Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H17
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.30
08_02_0888 - 22284554-22285144 32 0.53
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 31 1.2
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 31 1.2
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 1.6
05_05_0055 + 21977546-21978061,21978144-21978162,21978168-219784... 30 2.1
03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 30 2.1
08_02_1583 + 28036125-28037030,28037411-28037656 30 2.8
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 30 2.8
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 30 2.8
03_05_1074 + 30168065-30168577 29 3.7
11_06_0168 + 20868696-20870072 29 4.9
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 4.9
02_02_0403 - 9866122-9867231 29 4.9
11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600 29 6.5
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316... 29 6.5
03_01_0381 - 2960533-2960805 29 6.5
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.5
08_02_0405 + 16790720-16791691,16792064-16792135,16794487-167946... 28 8.6
04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423... 28 8.6
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 8.6
02_01_0384 - 2781362-2782299,2782320-2782428 28 8.6
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 28 8.6
02_01_0353 + 2545982-2549833 28 8.6
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 194 DPGARVVPGAAREPRHRPAHSHTL 265
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>08_02_0888 - 22284554-22285144
Length = 196
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 413 PTCSQPEPSYTLPLPPTRXRGSDVPVLQGLH 321
P QPEPS P P +G+DVPV+ H
Sbjct: 29 PMPDQPEPSQPEPSQPEESKGADVPVMVRTH 59
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 401 QPEPSYTLPLPPTRXRGSDVPVLQGLH 321
QPEPS P P +G+DVPV+ H
Sbjct: 330 QPEPSQLEPSQPEELKGADVPVMVRTH 356
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 334 NTGTSDPRFLVGGNGKVYEGSGWLHVGAHTYGYNSRSIGVAFIGNFNTDEPS 489
NTG S +GG G+++ G W + Y S S +A G + ++PS
Sbjct: 385 NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDIIASEGWNDWNDPS 436
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = -1
Query: 298 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 119
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 118 ASTTAEWRRAMSRSGACQHVSTRQ 47
AS E + S + +TR+
Sbjct: 94 ASLDQEVKERASPAAGKSGQATRR 117
>05_05_0055 +
21977546-21978061,21978144-21978162,21978168-21978486,
21978779-21978799,21980780-21980857,21981116-21981359
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 546 TSRGTTAPWRTDSSLPLRAPAGSSTTRYDAGLSGWR 653
T+R +P R P+RA AGSS T G WR
Sbjct: 79 TTRRRPSPGRLPRRSPIRARAGSSETSSPRGRENWR 114
>03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689
Length = 328
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 573 RTDSSLPLRAPAGSSTTRYDAGLSGWRXWTPSRTRNIITAYR--IXPFLLCSDLGXSV 740
R S++PL P + YD + +R + PSRTR + + + P + C G V
Sbjct: 178 RPGSTMPLAPPLAVAGAVYDDIVGAYRGFMPSRTRAFLVIHHGPLEPHVRCPYCGARV 235
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3
Query: 419 CAPTCSQPEPSYTLPLPPTRXRGSDVPVLQGLHVVGLDIPHELLAASVRPAEG 261
C P C QPE TL +PP G VLQ V GL + H +V P G
Sbjct: 242 CYPECPQPE--LTLGMPPHSDYGFLTLVLQD-EVAGLQVMHAGEWLTVDPLPG 291
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 321 CGWSGYSARAPRSQRPSCR 265
CG+ GYS AP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 413 PTCSQPEPSYTLPLPPTRXRGSDVPVLQGLH 321
P QPE S + P P +G+DVPV+ H
Sbjct: 529 PMPDQPEQSQSEPSQPEEPKGADVPVMVRTH 559
>03_05_1074 + 30168065-30168577
Length = 170
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 528 AAQQRPQRLQHRAARLVRVEVADECDSDGPRVVPVGVRADVQPAGA 391
A ++RP + + AA VR A D DGP V P + P A
Sbjct: 98 AMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAA 143
>11_06_0168 + 20868696-20870072
Length = 458
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 422 VCAPTCSQPEPSYTLPLPPTRXRGSDVP--VLQGLHVVGLDIPHELLAASV 276
+C P CS E T+ T SD+P +L + + L+IP L AASV
Sbjct: 29 LCLPPCSTKEELRTILTETTAREFSDLPHDILMDI-IAMLEIPDALRAASV 78
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 224 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 114
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 80 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGR-FDPGARVVPGAAREPRHRPAHS 256
P+H PL R+ S + R RRRQ +AM R F G +V G R A +
Sbjct: 297 PQHPVVPLSDDDRSDSPELPPESVPRRRRRQWRAMPRDFSHGRALVHGGHNNQRRGGAGA 356
Query: 257 -HTLLQDGRWLR 289
H+ RW R
Sbjct: 357 VHSPSSRYRWSR 368
>11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600
Length = 447
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -2
Query: 438 RVVPVGVRADVQPAGALVHLAVTSHQEXRVRCPS----IARPPCGWSGYSARAPR 286
R+ PV R QP GA + R+RCP+ +A C W +AR R
Sbjct: 218 RLPPVTARVAPQPGGAKGAMPRHGRPSLRLRCPASVTKLAMANCRWKMKNARRRR 272
>10_08_0825 +
20831170-20831349,20831380-20831547,20831627-20831698,
20831997-20832075,20832182-20832375,20832469-20832558,
20832851-20832940,20833196-20833282,20833477-20833560,
20833690-20833809,20834096-20834103,20834443-20834575,
20835044-20835125,20835330-20835496,20836006-20836493,
20836551-20836638,20836716-20836818,20836932-20837083,
20837191-20837316,20837459-20837529,20837691-20837753,
20838418-20838490,20838972-20839040,20839180-20839257,
20839434-20839484,20839586-20839696
Length = 1008
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 440 LELYP*VCAPTCSQPE-PSYTLPLPPTRXRGSDVPVLQGLHV 318
L L P P S+PE P++ LP PP+ S PVL + V
Sbjct: 20 LGLLPPTPPPPASRPEVPNHFLPPPPSSISHSVYPVLDPIEV 61
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 215 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 114
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 349 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 215
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>08_02_0405 +
16790720-16791691,16792064-16792135,16794487-16794621,
16794630-16794758
Length = 435
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = +1
Query: 289 RSSCGISRPTTWRPCNTGTSDPRF-------LVGGNGKVYEGSGWL 405
R++C R T PC G DPRF L GNG +Y G G L
Sbjct: 55 RAACHHWRSCTASPCGRGVVDPRFHPRRWMMLPEGNG-LYPGHGML 99
>04_04_0265 +
24040689-24041051,24041210-24041457,24041845-24042365,
24042433-24042968
Length = 555
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 151 AISVRSELRASASTTAEWRRAMSRSGACQHVS 56
A+S+R+ELR +A+W + M R H +
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAA 216
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 92 PPPLGSCTRARSQLASHRNSS 154
PP LGSC+R R A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 80 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGAAREPRHRPAHSH 259
P PLG CT A LA+ +S+ + A G G+ +P A PR P +
Sbjct: 143 PSSTSAPLGPCTLAHEGLAAVLATSKAASKSEAASG----GSSAIPPPATAPRFPPPRAM 198
Query: 260 T 262
T
Sbjct: 199 T 199
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 290 GARAEYPDQPHGGLAILGHRTLXSWWEVTARCTRAPAGCTSARTPTGTTRGPS 448
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 258 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 310
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 290 GARAEYPDQPHGGLAILGHRTLXSWWEVTARCTRAPAGCTSARTPTGTTRGPS 448
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 282 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,155,368
Number of Sequences: 37544
Number of extensions: 473698
Number of successful extensions: 2108
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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