Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H16
(901 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 317 3e-85
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 305 7e-82
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 232 1e-59
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 168 2e-40
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 153 6e-36
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 150 5e-35
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 144 3e-33
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 138 1e-31
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 136 7e-31
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 131 3e-29
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 128 1e-28
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 128 2e-28
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 112 1e-23
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 111 3e-23
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 107 4e-22
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 105 2e-21
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 103 8e-21
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 83 9e-15
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 83 1e-14
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 81 5e-14
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 75 3e-12
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 74 4e-12
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 72 2e-11
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 70 7e-11
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 69 2e-10
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 68 3e-10
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 68 4e-10
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 67 7e-10
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 65 2e-09
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 65 3e-09
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 64 6e-09
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 62 1e-08
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 62 2e-08
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 62 2e-08
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 61 3e-08
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 59 2e-07
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 56 2e-06
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 54 4e-06
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 53 9e-06
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 53 9e-06
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 51 3e-05
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 49 1e-04
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 48 2e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 48 3e-04
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 47 6e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 46 0.001
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 46 0.002
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 46 0.002
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 45 0.002
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 44 0.004
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 44 0.004
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 43 0.009
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.012
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 42 0.021
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.028
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 41 0.037
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.037
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 40 0.065
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 40 0.065
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 40 0.065
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.11
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.11
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 39 0.15
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.35
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.35
UniRef50_O86372 Cluster: Putative uncharacterized protein; n=7; ... 36 1.1
UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_A6G517 Cluster: Serine/threonine protein kinase; n=1; P... 34 4.3
UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;... 34 4.3
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 34 4.3
UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 34 5.7
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 34 5.7
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 317 bits (778), Expect = 3e-85
Identities = 142/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+K
Sbjct: 34 FAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
ATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRV LPSG
Sbjct: 94 ATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
AKKV+PS+NR MVGIVAGGGRID PILKAGRAYHKY V RN WP VRGVAMNP
Sbjct: 154 AKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIRAQRKGAGSVF +H KK KGA KLRSL
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSL 32
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
KASTV +G SAGRKVGLIAARRTGRI
Sbjct: 221 KASTVKRGTSAGRKVGLIAARRTGRI 246
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 305 bits (750), Expect = 7e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 232 bits (567), Expect = 1e-59
Identities = 116/186 (62%), Positives = 133/186 (71%)
Frame = +3
Query: 180 RXGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 359
R GKA L +AERHGY+KGVVKDI+HDPGRGAPLA V FRDPYK+K R E FIA E
Sbjct: 23 RKGKAALRAV--DFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRDPYKYKMRTETFIATE 80
Query: 360 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 539
G+YTGQF+Y C + + RG+LARASGN+ATVI HN
Sbjct: 81 GMYTGQFIY------------------------CGKKANLQIRGKLARASGNYATVISHN 116
Query: 540 PDAKRTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVR 719
PD K++RV LPSG+KKV+PS+NR +VGIVAGGGRID P+LKAGRAYHKY RNCWP VR
Sbjct: 117 PDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVR 176
Query: 720 GVAMNP 737
GVAMNP
Sbjct: 177 GVAMNP 182
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR+QRKG GSVF +HTK KG LR++
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAV 32
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
KASTV + SAGRKVGLIAARRTGR+
Sbjct: 197 KASTVRRDTSAGRKVGLIAARRTGRL 222
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 168 bits (408), Expect = 2e-40
Identities = 74/114 (64%), Positives = 92/114 (80%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAK 584
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR+ LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 153 bits (371), Expect = 6e-36
Identities = 79/165 (47%), Positives = 106/165 (64%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
++G V ++IHDPGR PLA V D +F L A EG+Y GQ + G A E GN
Sbjct: 38 LRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGN 92
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
++P+G +PEGT V N+E + GD G+LAR +G++A V+G +T + LPSG K +P+
Sbjct: 93 ILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPN 150
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+R +GI AG GRI+ PI+KAG AYHK+ V WP VRGVAMN
Sbjct: 151 DSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMN 195
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 150 bits (363), Expect = 5e-35
Identities = 76/165 (46%), Positives = 103/165 (62%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
KG V DI+H+PG AP+A + + +F A EGLY GQ V GK A+ + GN+
Sbjct: 39 KGYVVDILHEPGLNAPVAKIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNI 93
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSS 602
M +G +PEGT++ N+E++ GD G+ ARA G +A VIG P+ +T + LPSG + S
Sbjct: 94 MILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSR 153
Query: 603 NRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
R VGIVAGGGRI+ P LKAG+ YH+ +P VRG AM+P
Sbjct: 154 GRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSP 198
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 144 bits (349), Expect = 3e-33
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 225 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKA 401
+ + ++G V I HDP R AP+A V F+ +ELF+ A EG+ G + CG A
Sbjct: 34 DENSSLRGEVVGIEHDPARSAPIAKV------AFENGEELFLLASEGIAVGNIIECGDDA 87
Query: 402 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGA 581
++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A RT V +PSG
Sbjct: 88 EVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGN 145
Query: 582 KKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
K L R +VGIVAG GR+D P LKAG+ YHK +P V VAMNP
Sbjct: 146 IKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNP 197
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTG 852
K +TV + GRKVGLIAARRTG
Sbjct: 212 KPTTVSRNAPPGRKVGLIAARRTG 235
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 138 bits (335), Expect = 1e-31
Identities = 68/170 (40%), Positives = 98/170 (57%)
Frame = +3
Query: 225 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKAT 404
E+ G + G V +++HDP R AP+A V F D + L + PEG G + CG A
Sbjct: 37 EKKGKVVGKVVELLHDPARNAPVARVRFEDG-----EERLILVPEGTKVGDIIECGVSAE 91
Query: 405 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAK 584
++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D RT V LPSG
Sbjct: 92 IKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKV 149
Query: 585 KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+ R +G+++GGG+ + P +KAG+ Y+ WP VRGVAMN
Sbjct: 150 RTFDPRCRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMN 199
Score = 34.3 bits (75), Expect = 4.3
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGR 855
K +T+ +G GRKVG IAAR+TGR
Sbjct: 215 KPTTIARGDPPGRKVGHIAARKTGR 239
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 136 bits (329), Expect = 7e-31
Identities = 71/163 (43%), Positives = 98/163 (60%)
Frame = +3
Query: 246 GVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVM 425
G V DI+H+PG APLA++ D KF + +GL GQ + GK A + GN++
Sbjct: 39 GKVIDIVHNPGTNAPLALIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIV 93
Query: 426 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSN 605
VG +PEGTI+ N+E+ GD G+ AR++G + V+G D + V L S + S+
Sbjct: 94 EVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNA 151
Query: 606 RGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
R +VG+VAGGG + P+LKAG Y KY V WP+VRGVAMN
Sbjct: 152 RAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMN 194
Score = 33.5 bits (73), Expect = 7.5
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGR 855
+ STV + GRKVG IAARRTGR
Sbjct: 210 RPSTVSRNAPPGRKVGHIAARRTGR 234
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 131 bits (316), Expect = 3e-29
Identities = 68/182 (37%), Positives = 104/182 (57%)
Frame = +3
Query: 174 TRRXGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 353
+RR GK +++ E++ IKG++ D + P + F FK EL+IA
Sbjct: 47 SRRIGK--ISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIKIKFNVTKYFKNYYELYIA 104
Query: 354 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 533
E LY + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+
Sbjct: 105 VEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLS 164
Query: 534 HNPDAKRTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPY 713
H+ T++ LPS K+L S R +G+VAGGG+ + P+LKAG+ Y+K+ +P
Sbjct: 165 HSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPI 224
Query: 714 VR 719
V+
Sbjct: 225 VK 226
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 128 bits (310), Expect = 1e-28
Identities = 64/165 (38%), Positives = 99/165 (60%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
+G V DI+H+ RGAP+A++ F++ + A EG+YTGQ + G A +++GN+
Sbjct: 34 EGEVIDIVHERSRGAPVAIISFKED------DCMVPASEGMYTGQKILIGDDAPIDIGNI 87
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSS 602
+ +PEG V ++E GD G A +G+++ V+ H + T + +PSG K + S
Sbjct: 88 TKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSE 147
Query: 603 NRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
R +VG+VAGGG D P+LKA A++K + +P VRGVAMNP
Sbjct: 148 CRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNP 192
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 128 bits (309), Expect = 2e-28
Identities = 69/164 (42%), Positives = 98/164 (59%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
+G V ++ HDPGR PLA + + F A EG+YTGQ V G A GN+
Sbjct: 43 EGYVVELKHDPGRWVPLAHIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNI 97
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSS 602
+P+ A+PEGT + N+E + GD G+LAR+ G +A ++G + ++ + LPSG K + +
Sbjct: 98 LPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAK 155
Query: 603 NRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
R +GI AG GR + P+LKAG AY+K+ WP VRGVAMN
Sbjct: 156 ARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMN 199
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 112 bits (269), Expect = 1e-23
Identities = 64/165 (38%), Positives = 91/165 (55%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
+KG V +I D APL VV + + + L AP G+ G VY GK+A +G+
Sbjct: 39 VKGKVVALIKDSIHYAPLMVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGS 93
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+ P+ +PEGT + LE GD G+L RASG+FA ++ D + V LPSG K L +
Sbjct: 94 IKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSA 151
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+ R ++G++AGGGR + P +KAG Y+ WP V GV N
Sbjct: 152 NARAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKN 196
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 111 bits (266), Expect = 3e-23
Identities = 60/162 (37%), Positives = 87/162 (53%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
+G + D++H+ GR APLA V F D A G G+ + G K+ +E GNV
Sbjct: 41 EGEIIDLVHERGREAPLAKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNV 95
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSS 602
+ + +P+GTIVCN+E+ GD G + +++G ATV H + V LPSG L
Sbjct: 96 ISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPK 153
Query: 603 NRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVA 728
NR M+G +AGGG + P + AG + + +P VRGVA
Sbjct: 154 NRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVA 195
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 107 bits (257), Expect = 4e-22
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+ ER+GY+KGVV +IIHDPGRGAPLA V FR P++FK +KELF+ E +YCGKK
Sbjct: 34 FGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 488
ATL VGNV+P+ ++PEG + +G R
Sbjct: 94 ATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIRAQRK AGSVF SHT KG K RSL
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSL 32
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 105 bits (251), Expect = 2e-21
Identities = 68/164 (41%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVM 425
VVKDIIH PGR +PL + D T K+++ IA G Y GQ + G T+ G
Sbjct: 37 VVKDIIHAPGRNSPL--LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTT 90
Query: 426 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSN 605
+ +P+G+ V N+E GD G R++G FA V+ H R + LPSG+ +
Sbjct: 91 VLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMRDFDPRC 147
Query: 606 RGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPY-VRGVAMN 734
R VG+VA G ID PILKAG H Y + PY VRGVAMN
Sbjct: 148 RATVGVVAASGIIDAPILKAGTHVH-YLRSKAKRPYTVRGVAMN 190
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 103 bits (246), Expect = 8e-21
Identities = 59/162 (36%), Positives = 84/162 (51%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 422
+G V D++H+ GR APLA + F D L G G + G K+ + GNV
Sbjct: 40 EGTVIDLVHERGRDAPLAKIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNV 94
Query: 423 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSS 602
+ V +P+GT VCN+E+ GD G + +++G ATV H + LPSG L
Sbjct: 95 ISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPK 152
Query: 603 NRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVA 728
NR MVG +AGGG + P + AG + ++ +P VRGVA
Sbjct: 153 NRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVA 194
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 83.0 bits (196), Expect = 9e-15
Identities = 54/166 (32%), Positives = 88/166 (53%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
+ VK I +DP R A +A++ + D K +AP+GL G V G +A ++VGN
Sbjct: 74 VPATVKAIEYDPNRTANIALLVYADGVK-----SYILAPKGLEVGMQVQSGAEADIKVGN 128
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+P+ +P GT++ N+E K G G+LAR++G A ++G + K V L SG +++
Sbjct: 129 ALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLL 186
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
++R +G V G ++ +G+A + P VRG MNP
Sbjct: 187 TSRATIGTV---GNEQHELINSGKAGRTRWQGKR--PTVRGSVMNP 227
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 82.6 bits (195), Expect = 1e-14
Identities = 54/166 (32%), Positives = 87/166 (52%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
+ G V+ + +DP R A +A++ + D +AP+ L G V G ++ GN
Sbjct: 74 VVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVVAGNSVDVKPGN 128
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
MP+ +MP GTI+ N+E G G++AR++G +A ++G D + L SG ++++
Sbjct: 129 AMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILRLNSGEQRLVSG 186
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ VG V+ + KAGR+ V R P+VRGVAMNP
Sbjct: 187 ACFASVGAVSNPDHGNINDGKAGRS-----VWRGKRPHVRGVAMNP 227
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 80.6 bits (190), Expect = 5e-14
Identities = 53/166 (31%), Positives = 82/166 (49%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
I G + I +DP R A + ++H+ D K + P G G + G + +++GN
Sbjct: 72 IYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGN 126
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+P+ MP GT + N+E +G G+LARA+G A +I + K + LPSG +++
Sbjct: 127 ALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISK 184
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ VG V G + GRA K + + P VRGV MNP
Sbjct: 185 NCSATVGQV---GNVGVNQKSLGRAGSKCWLGKR--PVVRGVVMNP 225
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 74.5 bits (175), Expect = 3e-12
Identities = 50/166 (30%), Positives = 84/166 (50%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
+ G + I +DP R A + +V++ D K R LF +G+ G + + A ++VGN
Sbjct: 75 VVGTIATIEYDPNRNAFICLVNYLDGEK---RYILFA--KGMTVGMKIVASEHADIKVGN 129
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
P+ +PEGT++ N+E K G G++AR++G ++G + D K + L SG + + +
Sbjct: 130 AAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVLA 189
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+G V G + ++ G+A R P VRG MNP
Sbjct: 190 DCYATIGEV---GNEEYNLVNWGKAGRNR--WRGIRPTVRGSVMNP 230
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 74.1 bits (174), Expect = 4e-12
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Frame = +3
Query: 252 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT- 404
V I +DP R A + ++H+ D K I PEGL G V GK
Sbjct: 94 VVSIEYDPFRSARICLLHYADG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPE 148
Query: 405 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAK 584
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V +PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 585 KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCW-PYVRGVAMNP 737
+++ VG V G + ++K G+A + W P+ RG AMNP
Sbjct: 209 RMIHERCMATVGRV---GLAEHELVKLGKAGRARWLG---WRPHTRGTAMNP 254
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 71.7 bits (168), Expect = 2e-11
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVG 416
I+ VK I +DP R ++++ + + K I+P+G+ G + + ++ G
Sbjct: 79 IEATVKSIEYDPNRSCFVSLITYANG-----AKSYIISPDGIKVGDKILASEHPIDIKPG 133
Query: 417 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLP 596
MP+ +PEGT V N+E G++AR++G++A ++G + K + L SG +
Sbjct: 134 FSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGETRKFL 193
Query: 597 SSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
R VG+V+ I KAGR H R P VRG AMNP
Sbjct: 194 KECRATVGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNP 235
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 70.1 bits (164), Expect = 7e-11
Identities = 40/144 (27%), Positives = 76/144 (52%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
++G ++ + +DP R A +A+V Y+ +AP G G + G ++ ++VGN
Sbjct: 99 VRGTIRRLEYDPNRSAHIALVD----YEGGNASRYVLAPHGSTPGDALESGPESDIKVGN 154
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+P+ +P T + N+E G G+L R++G+ AT++ D V LPSG ++++
Sbjct: 155 ALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLE 214
Query: 600 SNRGMVGIVAGGGRIDXPILKAGR 671
+ +G+++ G + I KA R
Sbjct: 215 NCMATIGMLSNRGHQNRNIGKAAR 238
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 68.9 bits (161), Expect = 2e-10
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRK 338
+AERHGYI+GVVK+IIHDPGRGAPLA V FRD Y +K K
Sbjct: 30 FAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDVYSYKLIK 69
Score = 40.7 bits (91), Expect = 0.049
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 131 IRAQRKGAGSVFVSHTKKXKGAPKLR 208
IR+QRKGAG VF +HTK KGA +LR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLR 26
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 68.1 bits (159), Expect = 3e-10
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Frame = +3
Query: 348 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 527
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 528 I-GHNPDAKRTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNC 704
I HN K + LPSG K P +GIV+ + + KAG + ++ R
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDLKKAGAS--RWLGRR-- 311
Query: 705 WPYVRGVAMNP 737
P VRGVAMNP
Sbjct: 312 -PTVRGVAMNP 321
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 67.7 bits (158), Expect = 4e-10
Identities = 42/109 (38%), Positives = 59/109 (54%)
Frame = +3
Query: 411 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKV 590
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 591 LPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ S R +GIV+ KAG++ ++ R P VRGVAMNP
Sbjct: 419 IDSRCRATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNP 462
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 66.9 bits (156), Expect = 7e-10
Identities = 48/162 (29%), Positives = 81/162 (50%)
Frame = +3
Query: 252 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPV 431
V+ I +DP R A +A+V +RD + +AP GL G + G+ A ++VGN +P+
Sbjct: 84 VERIEYDPNRTAYIALVLYRDG-----ERRYIVAPAGLSAGSEIVAGEFAAIKVGNSLPL 138
Query: 432 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNRG 611
+P GT+V +E K G + AR++G ++ + + + + SG + + + +
Sbjct: 139 RNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYATLRMRSGEMRKVLADCKA 196
Query: 612 MVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+G V+ + KAG + R P VRGVAMNP
Sbjct: 197 TIGEVSNNEHNLVSLGKAGASR-----WRGVRPTVRGVAMNP 233
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 65.3 bits (152), Expect = 2e-09
Identities = 51/166 (30%), Positives = 74/166 (44%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
+ G + + +DP R A ++ VH D K PEG+ G + G A VGN
Sbjct: 74 VPGRIITVEYDPNRSAYISPVHHGDG-----DKGYISHPEGIRVGDAIPTGPGAPTTVGN 128
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
P MP GT++ +E G G+ ARA+G A + + +R LP G + +P
Sbjct: 129 APPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQ 186
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ +VG G +D +G+A K P VRGV MNP
Sbjct: 187 NRPAVVG---QAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNP 227
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 64.9 bits (151), Expect = 3e-09
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = +3
Query: 408 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKK 587
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK + LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 588 VLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ S +GIV+ + KAG H + R P VRGVAMNP
Sbjct: 353 AVDSRCHATIGIVSNPSHGTRKLRKAG---HSRWLGRR--PVVRGVAMNP 397
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 63.7 bits (148), Expect = 6e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Frame = +3
Query: 405 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAK 584
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ + L SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 585 KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+ + + +G+V+ KAGR+ H R P VRGVAMN
Sbjct: 272 RYVHMNCHATLGVVSNKEHQAISWGKAGRSRH-----RGKRPMVRGVAMN 316
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 62.5 bits (145), Expect = 1e-08
Identities = 42/109 (38%), Positives = 59/109 (54%)
Frame = +3
Query: 411 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKV 590
VGN + + +P GT V N+E G +L RA+G FA +I + + V LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 591 LPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ S R VGIV+ + KAG++ ++ R P VRGVAMNP
Sbjct: 381 IDSRCRATVGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNP 424
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 62.1 bits (144), Expect = 2e-08
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV----- 413
VV+ I HDPGR A +A+V ++ K +A EG+ G V+ E
Sbjct: 141 VVERIEHDPGRSAHIALVRSQETKKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSM 196
Query: 414 ----------------GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 545
GN +P+ MP GT+V N+ + G G+L R++G FATVI
Sbjct: 197 GGTVDPGVLAARTAWRGNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERI 256
Query: 546 AKRTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGV 725
++ + L SG +++ VG+ + + KAGR+ N P VRG+
Sbjct: 257 SQHVTIRLQSGEVRLIHKDCCATVGVASNPNHQYRQLGKAGRSR-----WLNIRPTVRGL 311
Query: 726 AMN 734
AMN
Sbjct: 312 AMN 314
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 61.7 bits (143), Expect = 2e-08
Identities = 41/110 (37%), Positives = 62/110 (56%)
Frame = +3
Query: 408 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKK 587
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 588 VLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
++ S R +GIV+ + KAG++ ++ R P VRGVAMNP
Sbjct: 417 LIDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNP 461
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 61.3 bits (142), Expect = 3e-08
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Frame = +3
Query: 225 ERHGYIKGVVKDIIHDPGRGAPLAVVHF----RDPYK--FKTRKELFIAPEGLYTGQFVY 386
+R+ + G V+ I +DP R + +A+V + P TR +A + TG V
Sbjct: 50 QRNTSLTGKVERIEYDPNRSSWIALVRWYSGSTQPQHQTASTRFTYILACDKFKTGSPVM 109
Query: 387 CGKKA--TLE--VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR 554
+ LE +GN + + +P GT++ N+E G + RA+G FA +I + R
Sbjct: 110 NNVHSFGNLEQALGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLIQKHEATVR 169
Query: 555 TRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
R LPSGA + S R +GIV+ KAG++ ++ R P VRGVAMN
Sbjct: 170 LR--LPSGALASINSQCRATIGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMN 222
Query: 735 P 737
P
Sbjct: 223 P 223
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 58.8 bits (136), Expect = 2e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Frame = +3
Query: 411 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKV 590
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + + LPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 591 LPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ + R +G V+ + KAG++ ++ R P VRGVAMNP
Sbjct: 73 INAKCRATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAMNP 116
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 55.6 bits (128), Expect = 2e-06
Identities = 35/111 (31%), Positives = 58/111 (52%)
Frame = +3
Query: 402 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGA 581
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 582 KKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+ + +G+V+ + + KAGR+ ++ R P VRGVAMN
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVAMN 339
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 54.4 bits (125), Expect = 4e-06
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Frame = +3
Query: 267 HDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGA 437
+DP R A LA++ + + K IAP GL G + KATL GN P+
Sbjct: 83 YDPNRTAHLALLKYENG-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSI 137
Query: 438 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNRGMV 617
+P T + +E G +L R +G ++ + ++ +PSG +++ R +
Sbjct: 138 IPPSTKLHCVELVPGKGAQLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPKCRATI 195
Query: 618 GIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
G V G ++ + KAGR +++ R P VRG+ MNP
Sbjct: 196 GEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNP 230
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 54.4 bits (125), Expect = 4e-06
Identities = 28/87 (32%), Positives = 53/87 (60%)
Frame = -3
Query: 491 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 312
T++TH + +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 311 AEVYNSQRCTSTRVMDYILNNSLDVSM 231
AE +S+ + ++D + +++L+V++
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAI 93
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 53.2 bits (122), Expect = 9e-06
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCG-KKATLEVG 416
IKG+V+ I +DP R A +A++ + D K I L FV K +L G
Sbjct: 48 IKGIVESIHYDPNRNARIALIKYLD-----GEKRYIIKTNNLEISNFVVSSLNKISLNSG 102
Query: 417 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLP 596
N + + GT++ +E G +R+SG+ + +I D K + LPSG KK +
Sbjct: 103 NSTIIKNINIGTLINCVEIFPKIGGIFSRSSGSESEII--FKDNKFGVIKLPSGIKKKIS 160
Query: 597 SSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ +G + + + KAG+ +++ R P VRGVAMNP
Sbjct: 161 LNCMATIGKIC-TFNVKKKLYKAGQ--NRW---RGIRPTVRGVAMNP 201
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 53.2 bits (122), Expect = 9e-06
Identities = 44/166 (26%), Positives = 77/166 (46%)
Frame = +3
Query: 240 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 419
I G V + +DP R + +A++ + + +APEGL G ++ + L+ GN
Sbjct: 55 IFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIFAKENIVLKPGN 109
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+ +P G + ++E + RA+G++AT+I + K + L SG + + S
Sbjct: 110 STYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILKLKSGELRRVHS 167
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ +G ++ I KAG + + P VRGVAMNP
Sbjct: 168 NCMATIGSISNFQYIYRNFRKAG-----FYRLKGWLPVVRGVAMNP 208
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 51.2 bits (117), Expect = 3e-05
Identities = 36/100 (36%), Positives = 51/100 (51%)
Frame = +3
Query: 438 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNRGMV 617
MP GT + N+E +G G+LARA+G A +I + K + LPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 618 GIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
G V G + GRA K + + P VRGV MNP
Sbjct: 61 GQV---GNVGVNQKSLGRAGSKCWLGKR--PVVRGVVMNP 95
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 49.2 bits (112), Expect = 1e-04
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 419
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+ + +P GTI+ N+ + + +++GNFA +I D + ++ LPSG P
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPI 188
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
++ +G ++ + I KAGR + R P VRGVAMNP
Sbjct: 189 TSLATIGSISNEQLRNIVIGKAGR---NRNLGRR--PIVRGVAMNP 229
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 339 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 449
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 48.0 bits (109), Expect = 3e-04
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Frame = +3
Query: 252 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTG--QFVYCGKKATLEVGNVM 425
V + +DP R + +VH + + F+ R + +AP+G + G F + + + +G
Sbjct: 51 VLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGINLFDFTKENPSNSIGCSQ 106
Query: 426 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSN 605
+ G+ V +++ + R++G+ V+ D T V +PS K S+
Sbjct: 107 FFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYFTFVKIPSSEVKKFSSNC 164
Query: 606 RGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
R +G V ++KAG + RN P VRGVAMNP
Sbjct: 165 RACLGQVGNESHFLSSLMKAGESR-----WRNKRPKVRGVAMNP 203
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 47.2 bits (107), Expect = 6e-04
Identities = 32/110 (29%), Positives = 55/110 (50%)
Frame = +3
Query: 405 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAK 584
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + + L SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 585 KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+ + +G+V+ KAGR +Y R P VRG+AMN
Sbjct: 280 RYISLDCHATLGVVSNKEHQLISWGKAGR--RRYLGKR---PVVRGMAMN 324
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.0 bits (104), Expect = 0.001
Identities = 35/109 (32%), Positives = 54/109 (49%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 428
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 429 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPS 575
+GA+P GT + LE+ G + L A+G F T++ D + V LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.6 bits (103), Expect = 0.002
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 RRXGKALLNFAL*XYAERHGY-IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 353
R G NF +R+ Y I G+V+ I +DP R A +A++ + D K K +
Sbjct: 26 RHIGGKTKNFYRIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKT 81
Query: 354 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 533
E + + + L+ GN + + GT++ E +G +R++G+ + +I
Sbjct: 82 NELEVSDKIISSLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIF 141
Query: 534 HNPDAKRTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPY 713
N + + L SG KK + + +G + ++ + KAG+ +++ R P
Sbjct: 142 KNNNF--GIIKLSSGIKKKISINCMATIGKIC-TFNLNKKLYKAGQ--NRWKGIR---PT 193
Query: 714 VRGVAMNP 737
VRGVAMNP
Sbjct: 194 VRGVAMNP 201
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 45.6 bits (103), Expect = 0.002
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDPYKFK-------------TRKELFIAPEGLYT--GQFV 383
+V+ I HDPGR A +A+V ++ K + + PE L+ G V
Sbjct: 140 LVERIEHDPGRSAHIALVRSQETQKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTV 199
Query: 384 YCGKKA--TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 551
G A T GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 200 DPGVLAARTAWRGNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 45.2 bits (102), Expect = 0.002
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 243 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGK-KATLEVGN 419
+G+V + +DP R + LA + D K IAP + G + ++ L+ G+
Sbjct: 56 QGIVVGLEYDPNRSSFLARIFNPDTKK----NNYIIAPTKIKKGDIIRSNSTRSGLQNGH 111
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+ + G+++ NL G G++ RA G F ++ + R L SG +
Sbjct: 112 SKTLQNILTGSLIYNLSLSPGKDGKILRAPGAFGRILKRTKTLAKIR--LKSGQYRWFDI 169
Query: 600 SNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
G+V+ + KAG++ ++ R P VRGVAMNP
Sbjct: 170 KTIATNGVVSNPDSRFTKLQKAGQS--RWLGRR---PTVRGVAMNP 210
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 246 GVVKDIIHDPGRGAPLAVVHF---RDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVG 416
G V+ + +DP R A LA++ R+ + T +AP G+ G V CG A + G
Sbjct: 135 GTVERLEYDPIRSARLALLRLDGAREGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPG 194
Query: 417 NVMPVGAMPEGTIVCNLEEKMG 482
+ +P+ A+P G + N+E + G
Sbjct: 195 SSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 44.4 bits (100), Expect = 0.004
Identities = 45/159 (28%), Positives = 74/159 (46%)
Frame = +3
Query: 258 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 437
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 438 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNRGMV 617
+ G+ + N+E + +G L + + N +I D T V LPSG K+L + ++
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLLLKNLFCIL 183
Query: 618 GIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
G + +++ I K K + P +RG AMN
Sbjct: 184 GQLEIRRKVNKNIKKHAGFNRKLSIR----PKIRGAAMN 218
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 43.2 bits (97), Expect = 0.009
Identities = 32/115 (27%), Positives = 57/115 (49%)
Frame = +3
Query: 393 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLP 572
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + V L
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 573 SGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
S +++ + +G V+ I+ I K+ +A + P VRG+AMNP
Sbjct: 161 SKECRLISNECYATIGTVS---NIEKKIKKSKKASESR--KKGIRPIVRGLAMNP 210
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 42.7 bits (96), Expect = 0.012
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 428
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 429 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
+GA+P GT + LE+ G L A+G F T++
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL 199
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 41.9 bits (94), Expect = 0.021
Identities = 24/94 (25%), Positives = 45/94 (47%)
Frame = -3
Query: 617 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRH 438
+H S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 437 SSNRHHISNFKSCFLSTINKLACVEPFGSNEELL 336
+ ++ + FL+ N+LA V ++ +
Sbjct: 128 RAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -3
Query: 491 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 312
T +TH + +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 311 AE 306
AE
Sbjct: 79 AE 80
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 41.1 bits (92), Expect = 0.037
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 749 GCXTRVHGNTTYIWPAVTXDLVLVVCPSSFQNRXVXXXXXXXXTDHASVA*WQNLL 582
G RVHG+T + WPA+ L+LV+ + QN V TDH+ V +LL
Sbjct: 49 GMLHRVHGHTPHAWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 41.1 bits (92), Expect = 0.037
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Frame = +3
Query: 414 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDA----KRTRVXLPSGA 581
GN +P+ +P GT + ++ ++ R++G F ++ + + +V L SG
Sbjct: 303 GNFLPLNLIPIGTTIHSITINPLGPAKMVRSAGTFGQLVAFSGRSGGGDSHAQVRLQSGE 362
Query: 582 KKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
+++PS+ +G V+ + KAGR+ ++ R P VRGVAMN
Sbjct: 363 VRLIPSNCCAAIGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMN 408
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.3 bits (90), Expect = 0.065
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +3
Query: 252 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 416
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 417 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 40.3 bits (90), Expect = 0.065
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXK 190
MGRVIRAQRKG GS+F SHT K
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 40.3 bits (90), Expect = 0.065
Identities = 34/121 (28%), Positives = 55/121 (45%)
Frame = +3
Query: 372 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 551
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 552 RTRVXLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAM 731
+ LPSG ++L + V + G I LK +A + + P VRGVAM
Sbjct: 167 YVTIKLPSGEIRLLNKN----VFCILGELNIIPLFLKKNKAGFNRLLGKR--PKVRGVAM 220
Query: 732 N 734
N
Sbjct: 221 N 221
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 39.5 bits (88), Expect = 0.11
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 252 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 428
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 429 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 39.5 bits (88), Expect = 0.11
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +3
Query: 228 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 395
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 396 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
A G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 39.1 bits (87), Expect = 0.15
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Frame = +3
Query: 249 VVKDIIHDPGRGAPLAVVHFRDP-YKFKTRKELFIAPEGLYTGQFVYCGKKAT--LEVGN 419
VV+ + +DP R + +V++++ Y F +A + G C K L+ GN
Sbjct: 74 VVESLEYDPNRSGFINLVYYKNGIYSF------ILATHNTFIGNVYMCNMKFFDFLKTGN 127
Query: 420 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPS 599
+P G+IV N+ ++ + R++G F ++ + ++ V S
Sbjct: 128 RSLFFNLPIGSIVHNVATTFNEKAKYLRSAGTFGLLLKKENNMALVKLPSNKNNNDVFLS 187
Query: 600 SNR---GMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+ G +G + + + + KAGR+ ++ R P VRGVAMNP
Sbjct: 188 CSLFGFGTLGKTSNLMQRNVNLGKAGRS--RWLGIR---PTVRGVAMNP 231
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 39.1 bits (87), Expect = 0.15
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Frame = +3
Query: 414 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD----------AKRTRV 563
GN +P+ +P GT+V N+ +M R++G +AT+I + K V
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
Query: 564 XLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMN 734
L SG + + +G+ + + KAGR+ N P VRG+AMN
Sbjct: 214 RLQSGEIRKVSKDACATIGVASNIMHQYRQLGKAGRSR-----LLNIRPTVRGLAMN 265
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.35
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 414 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 393 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 536
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_O86372 Cluster: Putative uncharacterized protein; n=7;
Mycobacterium tuberculosis complex|Rep: Putative
uncharacterized protein - Mycobacterium tuberculosis
Length = 116
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 730 MATPRTYGQQLRXTXYLWYALPAFKIGXSIRPPPATIPTMPLLLDGRTFLAPDGSXTLV 554
++T R G++ T W L ++ G + P P T+ ++LDG + DG+ T++
Sbjct: 20 VSTMRLQGREAGRTERFWVGLSVYRPGGTAEPAPTREETVYVVLDGELVVTVDGAETVL 78
>UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 734
Score = 34.7 bits (76), Expect = 3.3
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 3/129 (2%)
Frame = -1
Query: 610 PLLLDGRTFLAPDGSXTLVRLASGLCPITVAKF--PEARARRPLSPIFSSRLHTMVPSGI 437
P DGRTF+ L G C + K P A P SS + PSG
Sbjct: 315 PFCEDGRTFIHQAADSVLEASQKGECAVLTVKVKPPPATTSTPTPSANSS--ESTDPSGP 372
Query: 436 AP-TGITFPTSRVAFFPQ*TNWPV*SPSGAMKSSFLVLNLYGSRKCTTAKGAPLPGSWII 260
P T RV P +++ + P+ A++ +Y R+ A AP +
Sbjct: 373 RPRTRPATQEERVPIPPTISHFVMNLPATAIEFLSSYRGVYAGREALFAAAAPTSTTTTT 432
Query: 259 SLTTPLMYP 233
+ TTP + P
Sbjct: 433 TTTTPALPP 441
>UniRef50_A6G517 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 1324
Score = 34.3 bits (75), Expect = 4.3
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -1
Query: 739 PGFMATPRTYGQQLRXTXYLWYALPAFKIGXSIRPPPATIPT-MPLLLDGRTFLAPDGSX 563
P +MA + G+ + L YA+ + S+R P + T M LLLD +T APD
Sbjct: 218 PRYMAPEQAMGRGVGPAADL-YAVGVM-LYESLRGEPPFVGTAMQLLLDKQTAPAPDPGP 275
Query: 562 TLVRLASGLCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTG 425
+ LC +A+ PEA RP + +RL + + P G
Sbjct: 276 EVPEELRALCRALLAREPEA---RPSAAAARARLSVELREVLRPPG 318
>UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;
Acidovorax sp. JS42|Rep: ApbE family lipoprotein
precursor - Acidovorax sp. (strain JS42)
Length = 362
Score = 34.3 bits (75), Expect = 4.3
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 405 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK-RTRVXLPSGA 581
L++G V + + G V E+ G L G+ V+G D R V PS
Sbjct: 193 LDLGGVAKLPILQAGLQVL---ERAGVTDALVNGGGD-VLVMGRQHDRPWRVGVRNPSAP 248
Query: 582 KKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPY--VRGVAM 731
++L G+VA G + L+AGR H R WP V GVA+
Sbjct: 249 AQLLGVLELQGRGVVASSGDYERGFLRAGRRLHHVLNPRTGWPTEGVSGVAL 300
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 34.3 bits (75), Expect = 4.3
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 498 ARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNR-GMVGIVAGGGRIDXPILKAGRA 674
+R++G FA +I ++ LPSG +LPS N +GIV+ + I KAG+
Sbjct: 156 SRSAGTFAQII--QKTFTEIKLRLPSGKIILLPSKNGFAAIGIVSNLKQNMIVIGKAGK- 212
Query: 675 YHKYXVXRNCWPYVRGVAMNP 737
++ R P VRG+AMNP
Sbjct: 213 -NRLLGKR---PSVRGIAMNP 229
>UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 620
Score = 33.9 bits (74), Expect = 5.7
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = -1
Query: 643 IRPPPATIPTMPLLLDGRTFLAPDGSXTLVRLASGLCPITVAKFPEARARRPLSPI--FS 470
I P PAT+ + PL D + +P + ++RLA+ L P +A F + + RPL + S
Sbjct: 171 IAPQPATVTSKPLPDDPNSPSSPALTPWMIRLAAQLDPAAIAPF-SSLSERPLDGLEQVS 229
Query: 469 SRLHTM----VPSGIAPTGITF 416
R T VP G P TF
Sbjct: 230 DRHQTTLTFNVPVGWRPVVSTF 251
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 33.9 bits (74), Expect = 5.7
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 414 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKV 590
GN P+G++ GT++ ++E D +A+G AT++ H D T V LP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 591 LPSSNRGMVGIVAGGGRIDXPILKAGRAYHKY 686
L + VG ++ ID I + + + ++
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRF 248
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.9 bits (74), Expect = 5.7
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -1
Query: 640 RPPPA---TIPTMPLLLDGRTFLAPDGSXTLVRLASGLCPIT--VAKFPEARARRP 488
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,128,374
Number of Sequences: 1657284
Number of extensions: 16378450
Number of successful extensions: 40466
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 38916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40400
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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