Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H16
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0812 + 23383704-23384143,23384902-23385247                      268   3e-72
07_01_1201 - 11419851-11419913,11420090-11420311                       32   0.71 
06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788,611...    30   2.2  
03_03_0091 - 14371528-14372661                                         30   2.9  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    29   3.8  
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555...    29   6.7  

>12_02_0812 + 23383704-23384143,23384902-23385247
          Length = 261

 Score =  268 bits (658), Expect = 3e-72
 Identities = 116/173 (67%), Positives = 144/173 (83%)
 Frame = +3

Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
           + ER+GY+KGVV DIIHDPGRGAPLA V FR P+++K +KELF+A EG+YTGQFVYCG++
Sbjct: 34  FGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRR 93

Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
           ATL +GNV+P+ ++PEG +VCN+E  +GDRG  ARASG++A VI HNPD   +R+ LPSG
Sbjct: 94  ATLSIGNVLPIRSVPEGAVVCNVEHHVGDRGVFARASGDYAIVISHNPDNGTSRIKLPSG 153

Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
           AKK++PSS R M+G VAGGGR + P+LKAG AYHKY V RNCWP VRGVAMNP
Sbjct: 154 AKKIVPSSCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNP 206



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = +2

Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
           MGRVIRAQRKGAGSVF SHT   KG  + RSL
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSL 32



 Score = 36.3 bits (80), Expect = 0.033
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +1

Query: 784 ASTVXKGPSAGRKVGLIAARRTGRI 858
           ASTV +    G+KVGLIAARRTGR+
Sbjct: 222 ASTVRRDAPPGQKVGLIAARRTGRL 246


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 646 SIRPPPATIPTMPLLLDGRTFLAPDGSXTLVRLASGLCPITVAKFPEARARRPLSPIFSS 467
           ++ PPP  +P +P     R+   P G        +G  P        A  R+P +P+F S
Sbjct: 12  ALLPPPPPLPALPQGQQWRS-TGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70

Query: 466 RL 461
           R+
Sbjct: 71  RV 72


>06_01_0811 -
           6113491-6113925,6114079-6114185,6114569-6114788,
           6115112-6115199,6115301-6115431,6115924-6116099,
           6116465-6116529,6117014-6117094,6117219-6117358,
           6117446-6117532,6117614-6117827,6118102-6118260,
           6118860-6118936,6119629-6119796
          Length = 715

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 629 WRWTY*XTYFESWKGIPQVXG 691
           W WTY  T+F SW  +P + G
Sbjct: 70  WSWTYWSTFFLSWSIVPTLQG 90


>03_03_0091 - 14371528-14372661
          Length = 377

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = -1

Query: 634 PPATIPTMPLLLDGRTFLAPDGSX-TLVRLASGLCPITVAKFPEARARRP-LSPIFSSRL 461
           PPA  P      D      P G+  T      G+ P + A    A A    L+P+F   +
Sbjct: 254 PPAPAPAPVKAEDALPHFFPQGAAVTATAHVHGVDPASAAASAAANAEGGILAPLFKEMV 313

Query: 460 HTMVPSGIAPTGITFP 413
             M+ +G+AP  +  P
Sbjct: 314 RAMLTAGMAPPSLEPP 329


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 506 LWKLRHCDWT 535
           LWK RHCDWT
Sbjct: 73  LWKCRHCDWT 82


>01_07_0112 -
           41149461-41151674,41151688-41153265,41154344-41155507,
           41155807-41156293,41156603-41156759,41157303-41157378
          Length = 1891

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 537 CVQSQWRSFQRHVPDDLYHPFSLQDCTQWY 448
           C    W++   H+P  L H  +  +C  WY
Sbjct: 73  CSCGLWKATTHHLPSALCHGLNYVNCAMWY 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,573,531
Number of Sequences: 37544
Number of extensions: 474020
Number of successful extensions: 1177
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)