Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H16
(901 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 306 8e-83
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 306 8e-83
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 306 8e-83
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 305 1e-82
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 305 1e-82
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 305 1e-82
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 305 1e-82
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 305 1e-82
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 279 7e-75
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 183 7e-46
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 40 0.009
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.016
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.016
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 37 0.087
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 306 bits (751), Expect = 8e-83
Identities = 138/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 306 bits (751), Expect = 8e-83
Identities = 138/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 306 bits (751), Expect = 8e-83
Identities = 138/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 305 bits (750), Expect = 1e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 305 bits (750), Expect = 1e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 305 bits (750), Expect = 1e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 305 bits (750), Expect = 1e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 305 bits (750), Expect = 1e-82
Identities = 137/173 (79%), Positives = 153/173 (88%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 34 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 93
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSG 578
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG
Sbjct: 94 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSG 153
Query: 579 AKKVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
+KKV+ S+NR +VG+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 119 MGRVIRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
MGRVIR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRL 246
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 279 bits (685), Expect = 7e-75
Identities = 126/160 (78%), Positives = 140/160 (87%)
Frame = +3
Query: 258 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 437
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 438 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLPSGAKKVLPSSNRGMV 617
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRV LPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 618 GIVAGGGRIDXPILKAGRAYHKYXVXRNCWPYVRGVAMNP 737
G+VAGGGRID PILKAGRAYHKY RNCWP VRGVAMNP
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 160
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 781 KASTVXKGPSAGRKVGLIAARRTGRI 858
K ST+ + AGRKVGLIAARRTGR+
Sbjct: 175 KPSTIRRDAPAGRKVGLIAARRTGRL 200
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 183 bits (446), Expect = 7e-46
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +3
Query: 219 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 398
+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKK
Sbjct: 30 FAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK 89
Query: 399 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 521
A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 90 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 131 IRAQRKGAGSVFVSHTKKXKGAPKLRSL 214
IR QRKGAGSVF +H K KGA +LR++
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAV 28
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 40.3 bits (90), Expect = 0.009
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Frame = +3
Query: 228 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 395
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 396 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVXLP 572
A G+ P+GA+P GT++ N+E + G + RA+G ++ + + LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLP 229
Query: 573 SGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGR 671
S + + + VG V+ I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.016
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +3
Query: 228 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 395
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 396 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
A G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.016
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +3
Query: 228 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 395
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 396 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 530
A G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 37.1 bits (82), Expect = 0.087
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 330 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 494
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 495 LARASGNFATVI 530
RA+G ++
Sbjct: 203 YIRAAGTCGVLL 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,121,418
Number of Sequences: 237096
Number of extensions: 2626381
Number of successful extensions: 4794
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4793
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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