Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H11
         (1036 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    35   0.12 
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           27   0.64 
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     30   2.6  
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597...    30   3.5  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +1

Query: 355  GXPPXKXXGG-GXXXXGPPPXXFFXXXPXKKXXGGXXPPPP 474
            G PP    GG G     PPP  F    P     GG  PPPP
Sbjct: 1147 GVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
 Frame = +1

Query: 361  PPXKXXGGGXXXXGPPPXXFFXXXPXKKXXGG--XXPPPPXXXXXXXXXXXAKTXTPXPX 534
            PP     G      PPP       P     GG    PPPP                P   
Sbjct: 1086 PPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGI 1145

Query: 535  XGXXPPPP 558
             G  PPPP
Sbjct: 1146 GGVPPPPP 1153


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 27.5 bits (58), Expect(2) = 0.64
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +1

Query: 130 PXPFXSXPXXXXXGXXXNPXXTPPXXVXAPPXPXGWXLGPXP 255
           P P    P     G    P   PP    A P P G   GP P
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPP 372



 Score = 23.4 bits (48), Expect(2) = 0.64
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 355 GXPPXKXXGGGXXXXGPPP 411
           G PP     GG    GPPP
Sbjct: 382 GGPPPPALPGGPRARGPPP 400


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +2

Query: 104 AXGFGXXKYLXLLXPHPXXXXGXXFXTPWX-PPPFXFXPPPXPXVGXWGP 250
           A G+    Y+    P P    G     PW  PPP+   PPP P    + P
Sbjct: 411 AGGYTSQPYMGAPPPPPP---GSYAPVPWGQPPPYASYPPPPPGSSMYNP 457


>03_02_0155 -
           5974118-5974173,5974242-5974314,5974393-5974500,
           5975189-5976914,5977065-5977620,5978008-5978485
          Length = 998

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/52 (28%), Positives = 17/52 (32%)
 Frame = +1

Query: 403 PPPXXFFXXXPXKKXXGGXXPPPPXXXXXXXXXXXAKTXTPXPXXGXXPPPP 558
           PPP   +   P     G   PPPP             +  P P     PPPP
Sbjct: 51  PPPQAMYQAHPQYPMPGSLPPPPPRPPSFAPENALPPSSPPPP--SPPPPPP 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,218,463
Number of Sequences: 37544
Number of extensions: 479140
Number of successful extensions: 2888
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2704
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3047748156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)