Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H10
(892 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 223 4e-57
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 5e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 85 3e-15
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 73 1e-11
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 67 5e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 58 4e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 57 7e-07
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 54 6e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.016
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.085
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.6
UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 33 9.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 223 bits (546), Expect = 4e-57
Identities = 105/126 (83%), Positives = 106/126 (84%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGXTRQDYKDTRRFPLEAPSCALLFRP 666
SK+ T R RFSIGSAPLTSITKIDAQVRGG TRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 667 CRLPDTCPPFSLREAWRFLIXHAVXISXRCXSFAPXWAVCTNPPXXPTXAPYPVXIVLSP 846
CRLPDTCPPFSLREAWRFLI HAV IS RC SFAP WAVCTNPP PT APYPV IVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 847 TRVXTT 864
TR TT
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (297), Expect = 5e-27
Identities = 72/120 (60%), Positives = 77/120 (64%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGXTRQDYKDTRRFPLEAPSCALLFRPCRLP 678
RPR RFSIGSAPLTSI K DAQ+ GG TRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGXTRQDYKDTRRFPLEAPSCALLFRP 666
V+ PR RFSIGSAPLTSITK DAQ+ GG TRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 84.6 bits (200), Expect = 3e-15
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = -2
Query: 858 VYPGWTQDDXYRIRRXGRXXRGVRAHSPXWSERXTPX*DTYSVXYEKAPRFPKGERRTGI 679
V PGWTQDD YR R R RGVRA+SP WSER P DT SV YEKAPRFPKG++ +
Sbjct: 6 VRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65
Query: 678 R*AAGSEQESARGSFQG 628
+G Q R + +G
Sbjct: 66 ---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 698 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 579
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 72.5 bits (170), Expect = 1e-11
Identities = 43/99 (43%), Positives = 45/99 (45%)
Frame = +1
Query: 580 VRGGXTRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIXHAVXISXRCX 759
VR G TRQD K P P PPFSL + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 760 SFAPXWAVCTNPPXXPTXAPYPVXIVLSPTRVXTTYXPG 876
SFAP WAV NPP PT APYPV + LSPTR T G
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATG 121
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 645 VRSPVPTLPLTGYLSAFLPSGSVALSHXSRCXYLXSV 755
+RSPVPTLPLTGYLSAFLPSGSVALSH SRC YL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 67.3 bits (157), Expect = 5e-10
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = -2
Query: 852 PGWTQDDXYRIRRXGRXXRGVRAHSPXWSERXTP 751
PGWTQDD YRIRR GR RGVRAHSP WSER TP
Sbjct: 8 PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -2
Query: 855 YPGWTQDDXYRIRRXGRXXRGVRAHSPXWSERXTPX*DT 739
+PGWTQ + YRIRR R RGV A+SP WSER TP DT
Sbjct: 7 FPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 56.8 bits (131), Expect = 7e-07
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 394 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 567
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 568 IDAQVRGGXTRQDYKDTRRFPLEAPSCALLFRP 666
I Q + T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +3
Query: 783 VHEPPVXXDRCALSGXYRLESNPGXHXLSP 872
+HEPPV DRCALSG YRLESNP H LSP
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 221 INKLTTTIAFILCFRFRXXVWEVFSALMNRPTRGERRFAYW 343
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.085
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 725 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 621
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 198
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 849 GWTQDDXYRIRRXGRXXRGVRAHSPXWSERXTPX*DTYSVXYEKAPRFPKGERRTG 682
GW + + + R GR R R +P W P D+ V + PR P RR G
Sbjct: 143 GWPRAEVVEVGRLGRGQRARRRDAPAWVRPREPRSDSSPVT-GRGPRAPSPTRRPG 197
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1
Query: 97 DPXMXXYIDXFGQTTTXMQ 153
DP M YID FGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,072,723
Number of Sequences: 1657284
Number of extensions: 14334251
Number of successful extensions: 38914
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 36856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38870
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -