Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H06
         (873 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin pro...    29   8.4  
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro...    29   8.4  
AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-P...    29   8.4  

>DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin
           protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 208 FNLIVFILFYLSTGLTVFYTFRLIIYVIINDFNLIIIYNLYDEDYIMLNRI 360
           F + V ++   S  LT+F  F L +     +  + +  +LYDEDY ML ++
Sbjct: 498 FFIAVMLICLASICLTIFGVFSLAVG---GNAEVFVCRSLYDEDYNMLGKL 545


>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
           protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 208 FNLIVFILFYLSTGLTVFYTFRLIIYVIINDFNLIIIYNLYDEDYIMLNRI 360
           F + V ++   S  LT+F  F L +     +  + +  +LYDEDY ML ++
Sbjct: 499 FFIAVMLICLASICLTIFGVFSLAVG---GNAEVFVCRSLYDEDYNMLGKL 546


>AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-PA
           protein.
          Length = 670

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 208 FNLIVFILFYLSTGLTVFYTFRLIIYVIINDFNLIIIYNLYDEDYIMLNRI 360
           F + V ++   S  LT+F  F L +     +  + +  +LYDEDY ML ++
Sbjct: 479 FFIAVMLICLASICLTIFGVFSLAVG---GNAEVFVCRSLYDEDYNMLGKL 526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,422,676
Number of Sequences: 53049
Number of extensions: 164613
Number of successful extensions: 348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)