Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_H05
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 50 3e-07
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 44 3e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 43 7e-05
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 40 6e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 39 0.001
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 39 0.001
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 36 0.010
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 34 0.031
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 34 0.031
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 32 0.093
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.22
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 30 0.38
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 30 0.38
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 29 0.87
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 2.0
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 28 2.0
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 2.7
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 26 6.1
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 6.1
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 26 8.1
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 26 8.1
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 50.4 bits (115), Expect = 3e-07
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Frame = +2
Query: 287 LGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVG-----IAKQEGILK 451
L + A T T PF++ KTR Q+Q ++ KL+ I +VG IA+ EGI
Sbjct: 32 LAACGAVTLTNPFEVIKTRFQLQGQLT------KLDPSKRIYKSVGQAFSLIARHEGIRG 85
Query: 452 LWSGLMPMFQRHAIYSGCRLIFYEHFRNMMK----DENGKXXXXXXXXXXXXXXXXXXXX 619
L GL + +GCRL FYE R + D+
Sbjct: 86 LQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALF 145
Query: 620 XXPTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGA 766
P LVK +MQ+ G+ +K+ ++ + E+G+ G + GA
Sbjct: 146 GSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGA 194
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 44.0 bits (99), Expect = 3e-05
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 287 LGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVG-IAKQEGILKLWSG 463
+G A P ++ KTRLQ+Q H N+ + AV IAKQEG+ + G
Sbjct: 119 VGDLFASVVYVPSEVLKTRLQLQGRYNNP-HFQSNYNYPSFRGAVKQIAKQEGMKTFFYG 177
Query: 464 LMPMFQRHAIYSGCRLIFYEHFRNMMKDENGK 559
R +SG +L+FYE R + + E G+
Sbjct: 178 YRATILRDIPFSGFQLLFYEKLRQVAQKECGQ 209
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +2
Query: 422 GIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDEN 553
G+ K EG+L L+ G P + S +FYE + N
Sbjct: 290 GLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGIIRLFNKNN 333
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 42.7 bits (96), Expect = 7e-05
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 5/175 (2%)
Frame = +2
Query: 275 AVAVL-GSWAAETATY---PFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEG 442
A+++L GS A T T+ PF+L K RLQ A+K+ +G + I KQE
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKN--ASKY------NGTVDCFTKIVKQER 156
Query: 443 ILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDENGK-XXXXXXXXXXXXXXXXXXXX 619
IL L++G RH +++ + RN + + +
Sbjct: 157 ILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFL 216
Query: 620 XXPTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGAIPNVQR 784
P D++K ++Q R + G+ P++ + E G ++G +P V R
Sbjct: 217 STPFDVIKSRIQTVPR--IAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLR 269
Score = 33.1 bits (72), Expect = 0.053
Identities = 23/101 (22%), Positives = 40/101 (39%)
Frame = +2
Query: 218 LRNADHPAVKTPDSVAARYAVAVLGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLEN 397
+RN+ PA + +G + PFD+ K+R+Q +A Y
Sbjct: 185 IRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKY---- 240
Query: 398 HGMIKTAVGIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFY 520
+ V +A++EG L+ G +P R G L+ +
Sbjct: 241 NWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVF 281
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 272 YAVAVLGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEGILK 451
+A + + YP D+ KTR+Q+ + K Y +G I K EG +
Sbjct: 12 FAAGAVAGISEVLTLYPLDVVKTRMQL----SVGKSDY----NGTFDCLKKIVKNEGPHR 63
Query: 452 LWSGLMP 472
L+ G++P
Sbjct: 64 LYRGILP 70
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 39.5 bits (88), Expect = 6e-04
Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 5/186 (2%)
Frame = +2
Query: 248 TPDSVAARYAVAVLGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGI 427
TP ++ Y + A P + + RLQIQ+ G + HG I
Sbjct: 108 TPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQT-------GKNVLYHGPWDCIKKI 160
Query: 428 AKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHF-RNMMKD----ENGKXXXXXXXXXXX 592
+ Q G+ + G P R A G + YE +N M + +
Sbjct: 161 SSQYGLSGIMKGYNPTAAREAHGLGMYFLAYEALVKNTMAKHHLTDRSQTPGWKLCVFGA 220
Query: 593 XXXXXXXXXXXPTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGAIP 772
P D+VK ++Q +G L T +KN +Y ++G+ GF+RG +P
Sbjct: 221 GAGYAMWLAAYPFDIVKSKIQTDG--FLSKAT--YKNSWQCAKGIYTKAGLRGFYRGFVP 276
Query: 773 NVQRAA 790
+ RAA
Sbjct: 277 VLVRAA 282
Score = 30.3 bits (65), Expect = 0.38
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 296 WAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEGILKLWSGLMPM 475
+A A YPFD+ K++ IQ++ +K YK + A GI + G+ + G +P+
Sbjct: 224 YAMWLAAYPFDIVKSK--IQTDGFLSKATYK----NSWQCAKGIYTKAGLRGFYRGFVPV 277
Query: 476 FQRHAIYSGCRLIFYE 523
R A + YE
Sbjct: 278 LVRAAPANAVTFYVYE 293
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 38.7 bits (86), Expect = 0.001
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +2
Query: 251 PDSVAARYAVAVLGSWAAETATY---PFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAV 421
PD + ++GS A Y P D K+R+Q ++A+K YK H K
Sbjct: 197 PDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRMQ---SLSASKE-YKNSIHCAYK--- 249
Query: 422 GIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMK 544
I Q+G+L+ WSG P R + G YE ++K
Sbjct: 250 -ILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEILK 289
Score = 35.9 bits (79), Expect = 0.008
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Frame = +2
Query: 401 GMIKTAVGIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDE---NGKXXXX 571
G ++ + I + GI L+ GL R A SG R Y + ++ + K
Sbjct: 145 GFLQASRIIVHENGIRGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEKLSTV 204
Query: 572 XXXXXXXXXXXXXXXXXXPTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILG 751
P D VK +MQ+ + +KN + + G+L
Sbjct: 205 TTFLVGSVAGIITVYCTQPIDTVKSRMQS------LSASKEYKNSIHCAYKILTQDGLLR 258
Query: 752 FWRGAIPNVQRAAL 793
FW GA P + R L
Sbjct: 259 FWSGATPRLARLIL 272
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 38.7 bits (86), Expect = 0.001
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 7/166 (4%)
Frame = +2
Query: 302 AETATYPFDLTKTRLQIQSEVAAA---KHGYKLENHGMIKTAVGIAKQEGILKLWSGLMP 472
++TA P + K +Q Q E+ A H YK G+ + A +EG++ LW G
Sbjct: 41 SKTAAAPIERVKLLIQNQDEMIRAGRLSHRYK----GIGECFKRTAAEEGVISLWRGNTA 96
Query: 473 MFQRHAIYSGCRLIFYEHFRNMM---KDENG-KXXXXXXXXXXXXXXXXXXXXXXPTDLV 640
R+ F + F+ M K+ +G D
Sbjct: 97 NVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYA 156
Query: 641 KVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGAIPNV 778
+ ++ + ++ +G +F VY Y G+ G +RG P+V
Sbjct: 157 RTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSV 202
Score = 32.3 bits (70), Expect = 0.093
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 626 PTDLVKVQMQAEGRNVLQGK-TPRFKNCRXVYAMLYAESGILGFWRGAIPNVQR 784
P + VK+ +Q + + G+ + R+K + AE G++ WRG NV R
Sbjct: 47 PIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLR 100
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 35.5 bits (78), Expect = 0.010
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 1/164 (0%)
Frame = +2
Query: 275 AVAVLGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEGILKL 454
A LG + + T P DL KTR Q + K M++ I + G+ L
Sbjct: 19 AAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPK---------MVRRI--ILHEGGVFSL 67
Query: 455 WSGLMPMFQRHAIYSGCRLIFYEHFRNMM-KDENGKXXXXXXXXXXXXXXXXXXXXXXPT 631
W G +P R S C F R+ + +N P
Sbjct: 68 WKGTLPSILRSTTGSSCYFYFLNWLRHFAPQSKNIASSHIQNLWMGGFARAAVGFAFMPV 127
Query: 632 DLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRG 763
++KV+ ++ L T + + R + + + GI GF+RG
Sbjct: 128 TVIKVRYESN----LYSYTTIYSSIRDI----WKKEGISGFFRG 163
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 236 PAVKTPDSVAARYAVAVLG---SWAAETA-TYPFDLTKTRLQIQSEV 364
P+ +V R V V+ S A TA T PFD+ KTR+Q++ +
Sbjct: 198 PSSSVQGTVPHRNIVNVMSGLISGATATAITNPFDMLKTRVQLEPHI 244
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 33.9 bits (74), Expect = 0.031
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 18/205 (8%)
Frame = +2
Query: 266 ARYAVAVLGSWAAETATYPFDLTKTRLQIQS--------EVAAAK---HGYKLENH--GM 406
A+ A +GS P D+ KTRLQ +S +++AK G G
Sbjct: 26 AKMLSACVGSVITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKILGKGRPAPKPLGGP 85
Query: 407 IKTAVGIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDENGKXXXXXXXXX 586
+ IA+ EG+ LW GL+P + + + YE + D
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPLYSDWG---FPAAAAIA 142
Query: 587 XXXXXXXXXXXXXPTDLVKVQMQAEGRNVLQGKTPRFKN-CRXVYAMLYAESGILGFWRG 763
P +L + ++QA G + G N ++ + GIL W G
Sbjct: 143 GASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGILNLWSG 202
Query: 764 AIPNVQR----AALVIWEISIIRLY 826
+ R +A W IRL+
Sbjct: 203 VSVTLWRDVPFSAFYWWSYERIRLF 227
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +2
Query: 272 YAVAVLGSWAA---ETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEG 442
YA + G+++ + YP D KTR+Q+ + V+ + G ++ + + I+ EG
Sbjct: 20 YAHLLAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSG------NIVNSVIKISSTEG 73
Query: 443 ILKLWSGLMPMFQ----RHAIY 496
+ LW G+ + HAIY
Sbjct: 74 VYSLWRGISSVIMGAGPSHAIY 95
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 32.3 bits (70), Expect = 0.093
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = +2
Query: 302 AETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEGILKLWSGLMPMFQ 481
A++ P D K Q A+ GY HG+ K I G+ L+ G
Sbjct: 31 AKSVVAPLDRVKILYQTNH---ASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGHTATLY 87
Query: 482 RHAIYSGCRLIFYEHFRNMM 541
R Y+G + + YE R ++
Sbjct: 88 RVFPYAGIKFVAYEQVRRVL 107
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 281 AVLGSWAAETATYPFDLTKTRLQIQSEVAAAKHGYKLENH---GMIKTAVGIAKQEGILK 451
+ LG+ A T + P D+ KTR Q+ + A K Y L+ G+++ A + + G+
Sbjct: 180 SALGTVVATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKG 239
Query: 452 LWSGL 466
GL
Sbjct: 240 FTRGL 244
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 30.3 bits (65), Expect = 0.38
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 10/176 (5%)
Frame = +2
Query: 281 AVLGSWAAETATYPFDLTKTRLQIQS------EVA---AAKHGYKLENHGMIKTAVGIAK 433
A+ G+ + T TYP D+ +TRL I++ +A A + K++ + T + I +
Sbjct: 123 AIAGAASCAT-TYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQ 181
Query: 434 QEG-ILKLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDENGKXXXXXXXXXXXXXXXXX 610
EG L++GL Y +E F N
Sbjct: 182 HEGGYPALYNGLPATLLNVVPYVSICFFTFE-FCKQKFFSNADLTAFQKLFLGGFTGIIG 240
Query: 611 XXXXXPTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGAIPNV 778
P D+++ + Q N + G +KN + +Y GI GF+RG N+
Sbjct: 241 QTLTFPADVLRRRFQV---NRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNM 293
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Frame = +2
Query: 269 RYAVAVLGSWA-AETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMI---------KTA 418
RY ++ LG+ PF+ +K QI + G + E + + ++A
Sbjct: 106 RYFISGLGTGTFISLFACPFEYSKLYSQIDMLLRKTNMGRRQETNSKLSVRPPLSSFQSA 165
Query: 419 VGIAKQEGILKLWSGLMPMFQRHAIYSGCRLIFYEHFR 532
I ++ G LW+G R A+ S C YE F+
Sbjct: 166 SDIVRRYGFTALWNGYRYHLTRDALGSACYFTIYETFK 203
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -3
Query: 538 HVPEMFVEDETASGVNRVPLEHRHETAP*FQNSLLFGDTHCCFDHTVI 395
H+P M E++T V E + S +G HC DH +I
Sbjct: 130 HIPGMITENQTNDDAKEVNGSDVDEKSKHLYPSARYGHLHCVLDHYLI 177
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 281 AVLGSWAAETATYPFDLTKTRLQ 349
A L AA T TYP ++ +TRLQ
Sbjct: 293 ATLSKIAASTVTYPHEVLRTRLQ 315
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 2.0
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +2
Query: 272 YAVAVLGSWA---AETATYPFDLTKTRLQIQSEVAAAKHGYKLENHGMIKTAVGIAKQEG 442
+ A+ GS A A T PFD+ KTR+ + + Y + T I EG
Sbjct: 259 HEAAISGSIAGGIAAALTTPFDVVKTRIMTSQQ----RLSY-------VFTIKSIVAHEG 307
Query: 443 ILKLWSGLMP----MFQRHAIYSGCRLIFYEHFRNMMKDE 550
L L+ G++P + AI+ GC Y+ N MK E
Sbjct: 308 FLALYKGIVPRVLWLSGGGAIFLGC----YDVILNFMKAE 343
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 626 PTDLVKVQMQAEGRNVLQGKTPRFKNCRXVYAMLYAESGILGFWRGAIPNV 778
P ++ +V+MQ+ + + Q +P +Y +GI G +RGA+P +
Sbjct: 224 PLEVARVEMQSLTKGI-QHSSPGIMQ---TIMSIYKNNGIKGLYRGAVPRM 270
>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 790
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 449 KLWSGLMPMFQRHAIYSGCRLIFYEHFRNMMKDEN 553
KLW+ L + R Y R FYE N+M N
Sbjct: 255 KLWTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRN 289
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 294 RGRPKLRHTRST*PRQGYKYNRKWQPLNTVTSWKITV*SKQQWVSPNKRE 443
RGR R TRS + Y +R P+N + K K + +SP RE
Sbjct: 640 RGRSYSRSTRSYSKSRSYSRSRSVTPINNINHKKYI--RKDRELSPRGRE 687
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 623 KRSAVPANQPPNHPMKQHP 567
KR+ PAN P N PMK P
Sbjct: 107 KRNQDPANNPLNKPMKLSP 125
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 368 LPLPIVFVALSWSSRTGMSQFRPPTTRAQRPHTSLP 261
LP P+ +A + R + F+PP Q+P S P
Sbjct: 123 LPGPVDRIAFAARKRARIEAFQPPPIIPQKPLASTP 158
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,352,206
Number of Sequences: 5004
Number of extensions: 66127
Number of successful extensions: 204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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