Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H03
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    34   0.11 
Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL132948-25|CAC51048.1|  438|Caenorhabditis elegans Hypothetical...    29   5.5  
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr...    28   9.7  
U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical pr...    28   9.7  
M11499-1|AAA28165.1|  259|Caenorhabditis elegans protein ( C.ele...    28   9.7  
AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine re...    28   9.7  
AF047659-4|AAQ01529.1|  201|Caenorhabditis elegans Vitellogenin ...    28   9.7  
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ...    28   9.7  
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ...    28   9.7  

>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.2 protein.
          Length = 1140

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 203 FKVSPTPSRYSRLCHLGQGKWGEGRSSGLWERATKDFLVK 322
           F  S T  R+ R+ HL Q  WG  +S GLW+ A    L++
Sbjct: 98  FWYSDTKDRFERITHLNQ--WGNTKSFGLWDSALDSKLIE 135


>Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical
           protein F31B9.3 protein.
          Length = 214

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 137 CVNAQVSMPPGLRREVSDHQPIFKVSPTPSRYSRLCHL 250
           CV+  V  P G R  V +   + + +P PS Y+RLC++
Sbjct: 100 CVDMYVDFPDGQRMPVDEF--VKQYAPGPSFYNRLCNM 135


>AL132948-25|CAC51048.1|  438|Caenorhabditis elegans Hypothetical
           protein Y39B6A.33 protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 357 RSSLKNXPVVTTFTKKSLVALSQSPEDLPSPHXPCPK 247
           R++  N PVV   TKK   AL +  +++   H   PK
Sbjct: 59  RTATANKPVVPKLTKKQQAALEKITKNITQEHVTLPK 95


>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
           protein.
          Length = 1651

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 168 PGGIET*AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXF 34
           P GI       T    D NT+   L   RF  S+QESN++ +  F
Sbjct: 58  PQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF 102


>U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical
           protein F35H12.2a protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 147 AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXFHY 28
           +FTH  S  ++N+ + +  C  FR S+ E+    L  F Y
Sbjct: 100 SFTHKISVGEHNSSDILHQCHVFRTSKAETAAKALYSFSY 139


>U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical
           protein F35H12.2b protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 147 AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXFHY 28
           +FTH  S  ++N+ + +  C  FR S+ E+    L  F Y
Sbjct: 100 SFTHKISVGEHNSSDILHQCHVFRTSKAETAAKALYSFSY 139


>M11499-1|AAA28165.1|  259|Caenorhabditis elegans protein (
           C.elegans vitellogenin6 gene ancoding yolk protein
           VIT180. ).
          Length = 259

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 168 PGGIET*AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXF 34
           P GI       T    D NT+   L   RF  S+QESN++ +  F
Sbjct: 58  PQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF 102


>AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 68 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 114 NTLEYILNCDRFRCSRQE 61
           NT++  +NCD FRCS  E
Sbjct: 149 NTIDTPMNCDHFRCSFNE 166


>AF047659-4|AAQ01529.1|  201|Caenorhabditis elegans Vitellogenin
           structural genes (yolk protein genes) protein 6, isoform
           b protein.
          Length = 201

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 168 PGGIET*AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXF 34
           P GI       T    D NT+   L   RF  S+QESN++ +  F
Sbjct: 58  PQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF 102


>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
           structural genes (yolk protein genes) protein 6, isoform
           a protein.
          Length = 1650

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 168 PGGIET*AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXF 34
           P GI       T    D NT+   L   RF  S+QESN++ +  F
Sbjct: 58  PQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF 102


>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
           structural genes (yolk protein genes) protein 6, isoform
           c protein.
          Length = 1651

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 168 PGGIET*AFTHTRSAADNNTLEYILNCDRFRCSRQESNNLNLKXF 34
           P GI       T    D NT+   L   RF  S+QESN++ +  F
Sbjct: 58  PQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,576,246
Number of Sequences: 27780
Number of extensions: 327229
Number of successful extensions: 755
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)