Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H02
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0437 - 3449611-3449715,3451831-3451878,3452002-3452120,345...    85   5e-17
04_04_1505 + 34047892-34047942,34048072-34048272,34048922-34049554     31   1.4  

>12_01_0437 -
           3449611-3449715,3451831-3451878,3452002-3452120,
           3452277-3452422,3452760-3452986
          Length = 214

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 39/63 (61%), Positives = 46/63 (73%)
 Frame = +1

Query: 235 AVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDL 414
           A+VCSSNMNRSMEAH+ L + G +V SYGTG  VKLPG S   PN Y+FG  Y+ IY+DL
Sbjct: 10  AMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDDL 69

Query: 415 MEK 423
             K
Sbjct: 70  RRK 72


>04_04_1505 + 34047892-34047942,34048072-34048272,34048922-34049554
          Length = 294

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 250 SNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYE-FGVLYDEIYNDLMEKX 426
           S+M R +   A  +K G  +     G      G + D+   YE +GV++D+ + DL+E+ 
Sbjct: 121 SDMMRFLHCRAAELKTGGAIFIVSLGRLSSTCGPT-DQGYIYEVYGVMFDDSWRDLIEEG 179

Query: 427 KITTLKMDCY 456
            +   KMD +
Sbjct: 180 MVDGEKMDSF 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,187,892
Number of Sequences: 37544
Number of extensions: 169545
Number of successful extensions: 302
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)