Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_H02
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40030-1|AAR12977.1|  235|Caenorhabditis elegans Hypothetical pr...    97   1e-20

>U40030-1|AAR12977.1|  235|Caenorhabditis elegans Hypothetical
           protein T13C2.4 protein.
          Length = 235

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
 Frame = +1

Query: 226 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFG-VLYDEI 402
           L  AV CSSNMNRSMEAH  L K+GFN++SYG+G +VK+PG + D+PNCYEFG   Y++I
Sbjct: 45  LRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYEDI 104

Query: 403 YNDLMEK-XKITTLKMDCYIC*TGIEE*SXXRKFQVCNERFDVIIIVKK 546
           Y DL  K   + T     ++        S  ++FQ     FD+++ +++
Sbjct: 105 YADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETREFDIVLCLEE 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,299,676
Number of Sequences: 27780
Number of extensions: 170083
Number of successful extensions: 332
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)