Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G17
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p pro...    29   6.4  
AY069263-1|AAL39408.1|  426|Drosophila melanogaster GM06806p pro...    29   6.4  
AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA...    29   6.4  

>AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p
           protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 376 DRVEVKFISGAPPELVLLGEGDHELERLPLSHLNQEQCNELI-QSKGFSNNKK 531
           +R+ + F S    +L  L EG     RLP +H+N E+C++L  Q   F+  KK
Sbjct: 562 ERIIIPFFSLFVKDLYFLNEGCSN--RLPNNHINFEKCSQLAKQVMEFNEWKK 612


>AY069263-1|AAL39408.1|  426|Drosophila melanogaster GM06806p
           protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 376 DRVEVKFISGAPPELVLLGEGDHELERLPLSHLNQEQCNELI-QSKGFSNNKK 531
           +R+ + F S    +L  L EG     RLP +H+N E+C++L  Q   F+  KK
Sbjct: 308 ERIIIPFFSLFVKDLYFLNEGCSN--RLPNNHINFEKCSQLAKQVMEFNEWKK 358


>AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA
           protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 376 DRVEVKFISGAPPELVLLGEGDHELERLPLSHLNQEQCNELI-QSKGFSNNKK 531
           +R+ + F S    +L  L EG     RLP +H+N E+C++L  Q   F+  KK
Sbjct: 562 ERIIIPFFSLFVKDLYFLNEGCSN--RLPNNHINFEKCSQLAKQVMEFNEWKK 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,001,756
Number of Sequences: 53049
Number of extensions: 481642
Number of successful extensions: 849
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)