Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G17
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81474-5|CAB03906.1|  361|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical ...    31   1.1  
L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z81474-5|CAB03906.1|  361|Caenorhabditis elegans Hypothetical
           protein C18D4.9 protein.
          Length = 361

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 533 LTYKLLSVYGTVHSTHRNRYLCFIQMSQMSRLLSKAAICTFGQKKFIDMSIQIYLNIIVS 712
           L+Y  L  Y  VH  +R R   F  + +    + K A  +F    F+ + I +++  ++S
Sbjct: 29  LSYFTLPFYVYVHKINRQRETSFPLIMKHFYKMIKVAYFSF----FMLIGIVLFIGFLIS 84

Query: 713 FKEYCSKPALN 745
               CSKP +N
Sbjct: 85  EINVCSKPVVN 95


>AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical
           protein Y76B12C.3 protein.
          Length = 152

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 289 SARIEXCRGCSLNRLPEVKRFVMDDAPNY--DRVEVKFISGAPPELVL 426
           +A +E C  C+L R P+V+ FV  D       +V+VK + G  P++ L
Sbjct: 76  TAILEVCE-CNLARFPQVQAFVHKDMARQFGGKVKVKHVRGVRPQVAL 122


>L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical
           protein ZK688.2 protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 371 LGASSITNRFTSGRRFNEHPRQXSIRADTMSDNSXSEDKAT 249
           +  SS   +  +G+R +EHP Q  +  D + D+   E++ T
Sbjct: 496 IDTSSSQPQLATGKRGSEHPFQHHVLDDVLEDDESDENQLT 536


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,813,282
Number of Sequences: 27780
Number of extensions: 262474
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)