Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_G16
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0082 - 40965947-40967023 32 0.54
05_01_0545 - 4756266-4757510 31 1.6
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.6
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 30 2.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 2.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 2.9
03_05_1081 + 30235677-30236474 30 2.9
09_02_0495 + 9880714-9881196 29 3.8
07_01_0080 + 587674-588510 29 3.8
07_01_0479 + 3606663-3607448 29 5.0
04_04_1542 - 34264994-34265331,34266195-34267029 29 5.0
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 29 5.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.7
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 29 6.7
11_06_0016 - 19284810-19284926,19285527-19286879 28 8.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.8
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 28 8.8
>01_07_0082 - 40965947-40967023
Length = 358
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPP 234
PP GY P PP G+ PPPP
Sbjct: 257 PPQYGYGYPAQPPPPQAGYGYPPPP 281
>05_01_0545 - 4756266-4757510
Length = 414
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPP 234
PPPP Y PL P V + PPPP
Sbjct: 387 PPPPAYPGPL-PPVYPVPYASPPPP 410
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +2
Query: 224 PPXPXGXPFGEKXKKKXXSPLXPPKKXPPXGGKXXXXXXXXXXXXXXXXXXXKNPPPXGX 403
PP P K P PPK PP PPP G
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPP----PPAKGPPPPPPPKGPSPPPPPPPGGK 373
Query: 404 XGGPPPP 424
GGPPPP
Sbjct: 374 KGGPPPP 380
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPPXG 240
PPPP P PP PPPP G
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGG 372
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPP 234
PPPP P+ PP VG PP P
Sbjct: 50 PPPPYQVMPVPPPPPPVGLPVPPLP 74
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 386 PPPXGXXGGPPPP 424
PPP G GGPPPP
Sbjct: 627 PPPPGKPGGPPPP 639
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 386 PPPXGXXGGPPPP 424
PPP G GGPPPP
Sbjct: 932 PPPPGKPGGPPPP 944
>03_05_1081 + 30235677-30236474
Length = 265
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 139 SKKXXFXPPPPGYXXPLVXPPXXVGFKXPPPP 234
+K + PPP Y P PP +G PPPP
Sbjct: 34 AKIPTYPPPPSAY--PAAPPPPVMGQPVPPPP 63
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +1
Query: 154 FXPPPPGYXXPLVXPPXXVGF---KXPPPPXGXTLW 252
+ PPPPG PP GF PPPP W
Sbjct: 79 YPPPPPGVMPGAFAPPFGGGFPYGPAPPPPNPILPW 114
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 769 PRXXGGGXXXXPXXXPXPXXXXXPPPPPP 855
PR G G P P P PPPPP
Sbjct: 80 PRLGGDGMFRRPPPPPPPPPSSGSPPPPP 108
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 163 PPPGYXXPLVXPPXXVGFKXPPPPXGXTLWGKN 261
PPPG + PP G PPPP G G+N
Sbjct: 228 PPPGMRPGMPPPPFRPGM--PPPPPGPQQPGQN 258
>04_04_1542 - 34264994-34265331,34266195-34267029
Length = 390
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 784 GGXXXXPXXXPXPXXXXXPPPPPP 855
GG P P P PPPPPP
Sbjct: 209 GGATIAPTPPPPPLALPLPPPPPP 232
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPP 234
PPPP PL PP F PPPP
Sbjct: 379 PPPPAMITPL--PPSTPVFTLPPPP 401
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVG----FKXPPPP 234
PPPP LV PP G F PPPP
Sbjct: 640 PPPPSLPNRLVPPPPAPGIGNKFPAPPPP 668
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 160 PPPPGYXXPLVXPPXXVGFKXPPPPXG 240
PPPP P + PP + PPPP G
Sbjct: 173 PPPP--PPPAIWPPQPSFYYYPPPPCG 197
>11_06_0016 - 19284810-19284926,19285527-19286879
Length = 489
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 769 PRXXGGGXXXXPXXXPXPXXXXXPPPPPP 855
P G P P P PPPPPP
Sbjct: 68 PASAAAGDGAAPDQEPPPSPPPPPPPPPP 96
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 160 PPPPG--YXXPLVXPPXXVGFKXPPPP 234
PPPP Y P PP V PPPP
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPP 109
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 781 GGGXXXXPXXXPXPXXXXXPPPPPP 855
GGG P P PPPPPP
Sbjct: 9 GGGEMLSPGEADWPPELRLPPPPPP 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,084,735
Number of Sequences: 37544
Number of extensions: 516535
Number of successful extensions: 7719
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6762
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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