Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G15
         (1297 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       26   0.68 
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    25   1.4  
08_01_0060 - 413088-413999                                             25   1.5  
07_01_0080 + 587674-588510                                             25   1.5  
02_05_0925 - 32768815-32769654                                         25   3.3  
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445...    25   8.7  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 25.8 bits (54), Expect(2) = 0.68
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 841 FFXXXXPPPPPPP 803
           F+    PPPPPPP
Sbjct: 316 FYPSPPPPPPPPP 328



 Score = 25.4 bits (53), Expect(2) = 0.68
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 823 PPPPPPPXXF 794
           PPPPPPP  F
Sbjct: 325 PPPPPPPPSF 334



 Score = 24.6 bits (51), Expect(2) = 9.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 838 FXXXXPPPPPPP 803
           F    PPPPPPP
Sbjct: 284 FSPPSPPPPPPP 295



 Score = 22.6 bits (46), Expect(2) = 9.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 820 PPPPPPXXF 794
           PPPPPP  F
Sbjct: 289 PPPPPPPAF 297


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 25.4 bits (53), Expect(2) = 1.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 823 PPPPPPPXXF 794
           PPPPPPP  F
Sbjct: 127 PPPPPPPPPF 136



 Score = 24.6 bits (51), Expect(2) = 1.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 841 FFXXXXPPPPPPP 803
           ++    PPPPPPP
Sbjct: 122 YYGHPPPPPPPPP 134


>08_01_0060 - 413088-413999
          Length = 303

 Score = 25.4 bits (53), Expect(2) = 1.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 823 PPPPPPPXXF 794
           PPPPPPP  F
Sbjct: 34  PPPPPPPLPF 43



 Score = 24.6 bits (51), Expect(2) = 1.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 838 FXXXXPPPPPPP 803
           F    PPPPPPP
Sbjct: 26  FDQPPPPPPPPP 37


>07_01_0080 + 587674-588510
          Length = 278

 Score = 25.4 bits (53), Expect(2) = 1.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 823 PPPPPPPXXF 794
           PPPPPPP  F
Sbjct: 114 PPPPPPPPLF 123



 Score = 24.6 bits (51), Expect(2) = 1.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 838 FXXXXPPPPPPP 803
           F    PPPPPPP
Sbjct: 88  FRRPPPPPPPPP 99


>02_05_0925 - 32768815-32769654
          Length = 279

 Score = 24.6 bits (51), Expect(2) = 3.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 838 FXXXXPPPPPPP 803
           F    PPPPPPP
Sbjct: 152 FDHHPPPPPPPP 163



 Score = 24.2 bits (50), Expect(2) = 3.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 823 PPPPPPPXXF 794
           PPPPPPP  +
Sbjct: 159 PPPPPPPAHY 168


>06_03_1006 +
           26844161-26844198,26844304-26844372,26844526-26844591,
           26844831-26844902,26844982-26845053,26846179-26846244,
           26846409-26846881,26846966-26847324,26847429-26847697,
           26847780-26847918,26848323-26848462,26848612-26848768,
           26848925-26848978,26849457-26849539,26851085-26851136
          Length = 702

 Score = 24.6 bits (51), Expect(2) = 8.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 838 FXXXXPPPPPPP 803
           F    PPPPPPP
Sbjct: 322 FAVDPPPPPPPP 333



 Score = 22.6 bits (46), Expect(2) = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 820 PPPPPPXXF 794
           PPPPPP  F
Sbjct: 326 PPPPPPPPF 334


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,779,584
Number of Sequences: 37544
Number of extensions: 264736
Number of successful extensions: 8554
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7123
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)