Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_G13
(1320 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 1.3
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 1.3
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 1.3
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 1.3
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 32 5.4
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 32 5.4
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 32 5.4
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 32 5.4
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 32 5.4
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 32 5.4
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 32 5.4
AB089939-1|BAD06471.1| 1039|Homo sapiens N-acetylgalactosaminylt... 31 7.1
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 9.4
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage factor
I 68 kDa subunit protein.
Length = 551
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PP L PL G P ++ PPP L+ PP P PP P +G
Sbjct: 253 PPPGQVLPPPLAGPP---NRGDRPPPPVLFP---GQPFGQPPLGPLPPGPPPPVPGYGPP 306
Query: 976 PXXAPSARXXXXPAPP 1023
P P + P P
Sbjct: 307 PGPPPPQQGPPPPPGP 322
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PP L PL G P ++ PPP L+ PP P PP P +G
Sbjct: 253 PPPGQVLPPPLAGPP---NRGDRPPPPVLFP---GQPFGQPPLGPLPPGPPPPVPGYGPP 306
Query: 976 PXXAPSARXXXXPAPP 1023
P P + P P
Sbjct: 307 PGPPPPQQGPPPPPGP 322
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PP L PL G P ++ PPP L+ PP P PP P +G
Sbjct: 290 PPPGQVLPPPLAGPP---NRGDRPPPPVLFP---GQPFGQPPLGPLPPGPPPPVPGYGPP 343
Query: 976 PXXAPSARXXXXPAPP 1023
P P + P P
Sbjct: 344 PGPPPPQQGPPPPPGP 359
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenylation
specific factor 6, 68 kD subunit variant protein.
Length = 551
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PP L PL G P ++ PPP L+ PP P PP P +G
Sbjct: 253 PPPGQVLPPPLAGPP---NRGDRPPPPVLFP---GQPFGQPPLGPLPPGPPPPVPGYGPP 306
Query: 976 PXXAPSARXXXXPAPP 1023
P P + P P
Sbjct: 307 PGPPPPQQGPPPPPGP 322
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 669 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 725
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 726 PGIPPPPPGMGMPPPP 741
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 63 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 119
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 120 PGIPPPPPGMGMPPPP 135
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 669 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 725
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 726 PGIPPPPPGMGMPPPP 741
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 679 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 735
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 736 PGIPPPPPGMGMPPPP 751
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 63 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 119
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 120 PGIPPPPPGMGMPPPP 135
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 658 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 714
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 715 PGIPPPPPGMGMPPPP 730
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 796 PPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXX 975
PPL P PPL PPP PP P I PP P F
Sbjct: 706 PPLPGSARIP-PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGG 762
Query: 976 PXXAPSARXXXXPAPP 1023
P P P PP
Sbjct: 763 PGIPPPPPGMGMPPPP 778
>AB089939-1|BAD06471.1| 1039|Homo sapiens
N-acetylgalactosaminyltransferase protein.
Length = 1039
Score = 31.5 bits (68), Expect = 7.1
Identities = 16/64 (25%), Positives = 19/64 (29%)
Frame = +1
Query: 832 GXPPLRHKXXXXPPPALYXLXXXXSXXXPPXXXXPNIXYPPTPXFGXXPXXAPSARXXXX 1011
G P PPP +Y P P +PP P P P +
Sbjct: 509 GRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAP 568
Query: 1012 PAPP 1023
P PP
Sbjct: 569 PRPP 572
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens cDNA
FLJ45135 fis, clone BRAWH3038252, highly similar to
Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 9.4
Identities = 26/99 (26%), Positives = 29/99 (29%)
Frame = +1
Query: 727 PPPXTXXXTXXSXAXXLXPXXXLPPLSXXLXXPLXGXPPLRHKXXXXPPPALYXLXXXXS 906
PPP L PP+ P+ PPL PPP L S
Sbjct: 294 PPPPASIPPPPPLPSGLGSLSPAPPMP-----PVSAGPPL-----PPPPPPPPPLPPPSS 343
Query: 907 XXXPPXXXXPNIXYPPTPXFGXXPXXAPSARXXXXPAPP 1023
PP P + P P P AP P PP
Sbjct: 344 AGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,744,223
Number of Sequences: 237096
Number of extensions: 907920
Number of successful extensions: 1770
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1726
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 19101041810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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