Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G09
         (866 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    39   0.14 
UniRef50_Q3CG81 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 39.1 bits (87), Expect = 0.14
 Identities = 37/109 (33%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
 Frame = +2

Query: 380 FFFFXXKKKXXXXXGGXXXKXPPXXXFFXKXXFFFFXKKXF*KXXXGXXXXXF---XKNP 550
           FFFF   +K     GG     PP      K  FFFF KK   +   G     F    +NP
Sbjct: 50  FFFFPRGEKIFFFGGGAPPPPPPLKK--KKKIFFFFFKK---RGGGGGFFFFFPPPQQNP 104

Query: 551 XPGXXGXFXKXXPXFFFFXXGGXXFFXGPPXXXPXFXXFXPGVKKPXGQ 697
            P     F      FFF   GG  F   PP     F  F P  KK  GQ
Sbjct: 105 PP--FFFFFLGFFLFFFKKRGGGGFSPPPPKKKKIF--FPPPKKKKKGQ 149


>UniRef50_Q3CG81 Cluster: Putative uncharacterized protein; n=1;
           Thermoanaerobacter ethanolicus ATCC 33223|Rep: Putative
           uncharacterized protein - Thermoanaerobacter ethanolicus
           ATCC 33223
          Length = 144

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 25/77 (32%), Positives = 28/77 (36%)
 Frame = +3

Query: 375 KXFFFXGXKKKXFXKXGGXXXXXPXXXXFFXKXXFFFFXKXFFKKXXGGXXXXFFXKTPX 554
           K FFF G  +       G     P    +  K  F FF K FF K        F+   P 
Sbjct: 22  KNFFFWGKSQFLKNPPWGGGPFFPLGGGWL-KGKFKFFPKKFFLKKN---LLVFWGPFPP 77

Query: 555 XGXGGXXXKXPPXFFFF 605
              GG     PP FFFF
Sbjct: 78  PLLGGFFKNSPPPFFFF 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,144,755
Number of Sequences: 1657284
Number of extensions: 3754316
Number of successful extensions: 4117
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3981
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)