Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G07
         (1242 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    32   1.1  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     31   1.4  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   3.3  
02_01_0475 + 3422629-3422695,3422960-3423216                           29   5.7  
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266     29   7.6  
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     29   7.6  
02_04_0103 - 19768288-19768737                                         29   7.6  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/46 (39%), Positives = 20/46 (43%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXKXXXSQXXXKXAPPKTPXGK 855
           KKKKKK      KKK  KKKK   K K    +   K    + P  K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNK 113


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +3

Query: 918 FXXXFFFFXXFFF*XRXXXFFFFFF 992
           F   FFFF  FFF      FFFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFFFFF 86



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 912 FXFXXXFFFFXXFFF*XRXXXFFFFFF 992
           F F   FFFF  FFF      FFFFFF
Sbjct: 62  FFFFFFFFFFFFFFF---FFFFFFFFF 85


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +3

Query: 930 FFFFXXFFF*XRXXXFFFFFF 992
           FFFF  FFF      FFFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFFFFFF 107



 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +3

Query: 930 FFFFXXFFF*XRXXXFFFFFF 992
           FFFF  FFF      FFFFFF
Sbjct: 88  FFFFFFFFFFFFFFFFFFFFF 108


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXKXXXS 900
           KKKKKK      KKK  KKKK   K K   S
Sbjct: 45  KKKKKKKKKKKKKKKKKKKKKKKKKKKNKLS 75



 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 43  KKKKKKKKKKKKKKKKKKKKKKKKKKK 69



 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 44  KKKKKKKKKKKKKKKKKKKKKKKKKKK 70


>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
          Length = 60

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 28  KKKKKKKKKKKKKKKKKKKKKKKKKKK 54



 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 29  KKKKKKKKKKKKKKKKKKKKKKKKKKK 55



 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 30  KKKKKKKKKKKKKKKKKKKKKKKKKKK 56


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 373 KKKKKKKKKKKKKKKKKKKKKKKKKKK 399


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 992 KKKKKKXXXPXLKKKXXKKKKXXXKXK 912
           KKKKKK      KKK  KKKK   K K
Sbjct: 113 KKKKKKKKKKKKKKKKKKKKKKKKKKK 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,453,405
Number of Sequences: 37544
Number of extensions: 128143
Number of successful extensions: 449
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)