Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_G06
(1070 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 5e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.007
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.068
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.090
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.28
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.48
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 0.51
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.64
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.9
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 5.9
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 7.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 5e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTX-LXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQP--PPXVPXX 972
PP PPP+ + P L T P P PP P S P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMGAPAA 446
Query: 973 XPRPPTXPSVACXLT---PXAPXXPPP-PXPXPAP 1065
P PP+ P +A L P AP PP P P PAP
Sbjct: 447 PPLPPSAP-IAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 36.3 bits (80), Expect = 0.007
Identities = 30/90 (33%), Positives = 32/90 (35%)
Frame = +1
Query: 793 PXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXX 972
P PP PPS P A P + P PPL PP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPM------------GAPAAPPL------------PPSAPIA 456
Query: 973 XPRPPTXPSVACXLTPXAPXXPPPPXPXPA 1062
P P P+ A L P AP PP P P PA
Sbjct: 457 PPLPAGMPA-APPLPPAAPAPPPAPAPAPA 485
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Frame = +1
Query: 907 PPLXXPXSRXQYXQPP-------PXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
PP P SR +PP +P P P + + + L P PPPP P AP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 30.3 bits (65), Expect = 0.48
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 4/91 (4%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXXXP- 978
PPPPPPS P P P PPP P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 979 ---RPPTXPSVACXLTPXAPXXPPPPXPXPA 1062
+PP S P AP P PA
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 801 PAPASAXXXPXRAPSDXPLLXPLFXHXVPPXPPXXP-PPXTPXLXXPIXPAP 953
P P P PS P P P PP P P P L + AP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Score = 27.1 bits (57), Expect = 4.5
Identities = 24/73 (32%), Positives = 25/73 (34%)
Frame = +3
Query: 729 TPXPLAPXXSRRXXXAAERVLXXXPAPASAXXXPXRAPSDXPLLXPLFXHXVPPXPPXXP 908
TP L P +A L APA A P AP PL P PP PP P
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMG-APA-APPLPPSAPIAPPL--PAGMPAAPPLPPAAP 474
Query: 909 PPXTPXLXXPIXP 947
P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.9
Identities = 24/93 (25%), Positives = 27/93 (29%), Gaps = 8/93 (8%)
Frame = +1
Query: 793 PXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXP-XXPXXPPLXXPXSR-------XQYXQ 948
P PP PPPS + P + PPL P SR +
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPP 1047
PPP P P P PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 5e-04
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +3
Query: 726 NTPXPLAPXXSRRXXXAAERVLXXXPAPASAXXXPXRAPSDXPLLXPLFXHXVPPXPPXX 905
++P PL P S + +L P P A P AP+ P+ P PP PP
Sbjct: 708 SSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-- 765
Query: 906 PPPXTPXLXXPIXPAP 953
PPP P P P
Sbjct: 766 PPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPP 1047
PP + P PP P VA P P PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPP--PPPPPPP 783
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
PPP V P P P + P AP PP P P P
Sbjct: 735 PPPAVIVPTPAPAPIP-----VPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPP 1044
PPP P PP P P P PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXP 1053
PPP P P P P PPPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.007
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Frame = +1
Query: 814 PPSXXPXAXPQTXLXXXXXXX---TXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXXXPR- 981
PPS PQ+ L + P PP+ PPP P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 982 PPTXPSVACXLTPXAPXXPPPP 1047
PP+ PS+ + P P PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.48
Identities = 22/101 (21%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +1
Query: 763 APXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXP--PLXXPXSRX 936
AP P + P PP PS P + P P P+ P S
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 937 QYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXP 1059
P +P P PP + + PP P
Sbjct: 189 SLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 29.5 bits (63), Expect = 0.84
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 907 PPLXXPXSRXQYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXP---PPPXPXPAP 1065
P P + +PP P PP P+ A + AP P PPP AP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 33.1 bits (72), Expect = 0.068
Identities = 28/106 (26%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Frame = +1
Query: 757 LXAPXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXX-PXXPXXPPLXXPXSR 933
L P P P P P P P + P P P +
Sbjct: 572 LSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEA 631
Query: 934 XQYXQPP--PXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
QPP P VP P P P+V + P AP P PP P
Sbjct: 632 PSVPQPPAAPVVPEV-PSVPQRPAVP--VVPEAPSVPQPPAAPVVP 674
Score = 31.5 bits (68), Expect = 0.21
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 6/115 (5%)
Frame = +1
Query: 739 H*PXAXLXAPXXPXNXFXPXXPPPPPPSXXPX--AXPQTX--LXXXXXXXTXXXPXXPXX 906
H P A AP P P P P P A P L P P
Sbjct: 530 HQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSV 589
Query: 907 P-PLXXPXSRXQYXQPPPXVPXXXPRPPTXPS-VACXLTPXAPXXPPPPXPXPAP 1065
P P P P P V P P+ P A + P AP P PP P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 644
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.090
Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Frame = +3
Query: 705 PNRSXG-PNTPXPLAPXXSRRXXXAAERVLXXXPAPASAXXXPXRAPSDXPLLXPLFXHX 881
P S G P+ P P+ S A PAP+ P + + P+ P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Query: 882 VPPXPPXXPPPXTPXLXXPIXPAP 953
P P PP P + P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 32.3 bits (70), Expect = 0.12
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +3
Query: 687 PXXSIAPNRSXGPNTPXPLA-PXXSRRXXXAAERVLXXXPAPASAXXXPXRAPSDXPLLX 863
P S+A P+ P+ P + A + P PA A P PS+ P +
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA-AGVPPVPPPSEAPPV- 1200
Query: 864 PLFXHXVPPXPP--XXPPPXTPXLXXPIXPAP 953
P VPP PP PP TP P P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 32.3 bits (70), Expect = 0.12
Identities = 24/94 (25%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXP----XXPPLXXPXSRXQYXQPPPXVPX 969
PP P PS P + + P P PP+ P +P VP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 970 XXP--RPPTXPSVACXLTP-XAPXXPPPPXPXPA 1062
P P P+ + L P P PP P P+
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 31.5 bits (68), Expect = 0.21
Identities = 23/88 (26%), Positives = 27/88 (30%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXXXPR 981
PP P PS P P+ + P P P PP P
Sbjct: 1131 PPVPVPSGAPPV-PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 982 PPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
P PS A + + PP P P AP
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 30.7 bits (66), Expect = 0.36
Identities = 26/88 (29%), Positives = 29/88 (32%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXXXPR 981
PP P PS P + + P P P P + PP VP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA-PSGAPPVPKPSVAAPPVPVPSGAP- 1140
Query: 982 PPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
P PSVA PP P P AP
Sbjct: 1141 PVPKPSVAA---------PPVPAPSGAP 1159
Score = 30.7 bits (66), Expect = 0.36
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = +1
Query: 802 PPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXXXPR 981
PP P PS P P+ + P P P + P PP P
Sbjct: 1112 PPVPAPSGAPPV-PKPSVAAPPVPVPSGAPPVPK-PSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 982 PPTXPSVACXLTPX-APXXPPPPXPXPAP 1065
P PS P A PP P P AP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 29.5 bits (63), Expect = 0.84
Identities = 28/107 (26%), Positives = 29/107 (27%), Gaps = 1/107 (0%)
Frame = +1
Query: 745 PXAXLXAPXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXP-PLXX 921
P AP P P P P P S P + P P P
Sbjct: 1025 PLPSADAPPIPVPSTAP--PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 922 PXSRXQYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPA 1062
P PP P P PSVA P PP P P A
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
Score = 29.1 bits (62), Expect = 1.1
Identities = 27/97 (27%), Positives = 30/97 (30%), Gaps = 6/97 (6%)
Frame = +1
Query: 793 PXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXP-XXPPLXXPXSRXQYXQPP---PX 960
P PP P P + P PP+ P S P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 961 VPXXXPRPPT-XPSVACXLTP-XAPXXPPPPXPXPAP 1065
VP PP PSVA P + PP P P AP
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/83 (25%), Positives = 26/83 (31%)
Frame = +3
Query: 705 PNRSXGPNTPXPLAPXXSRRXXXAAERVLXXXPAPASAXXXPXRAPSDXPLLXPLFXHXV 884
P S P P P + + A PAP+S P+ P V
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 885 PPXPPXXPPPXTPXLXXPIXPAP 953
P PP P + P PAP
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 27.9 bits (59), Expect = 2.6
Identities = 26/108 (24%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Frame = +1
Query: 745 PXAXLXAPXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXX--PPLX 918
P + AP P P P P + P P + + P P PP+
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 919 XPXSRXQYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPA 1062
P S PPP P P T AP P P P+
Sbjct: 1202 KP-SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Score = 27.1 bits (57), Expect = 4.5
Identities = 26/103 (25%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +1
Query: 763 APXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXX--PXSRX 936
AP P P P P S P A P P P P +
Sbjct: 1040 APPVPIPTSTP--PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 937 QYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
PP P P PS A + + PP P P AP
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +3
Query: 801 PAPASAXXXPXRAPSDXPLLXPLFXHXVPPXPPXXPPPXTPXLXXPIXPAP 953
P P+ A P + P+ P VP PP P P PAP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 5.9
Identities = 22/90 (24%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +3
Query: 687 PXXSIAPNRSXGPNTPXPLAPXXSRRXXXAAERVLXXX-PAPASAXXXPXRAPSDXPLLX 863
P S+A P+ P P S V P P+ A P + + P+
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 864 PLFXHXVPPXPPXXPPPXTPXLXXPIXPAP 953
P VP PP P P P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.28
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 1058 GXGXGGGGXXGAXGVRXQATEGXVGGRGXXXGTXGG 951
G G GGG GA G G GGRG G GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.9 bits (64), Expect = 0.64
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 1058 GXGXGGGGXXGAXGVRXQATEGXVGGRGXXXGTXGGGWXYWXREXGXXRGGXXGXXG 888
G G GG G G G GGRG G GG G RGG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 29.9 bits (64), Expect = 0.64
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -1
Query: 1070 RXGAGXGXGG---GGXXGAXGVRXQATEGXVGGRGXXXGTXGG 951
R G G G GG GG GA G R G GGRG G GG
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRG-GRGGARGGRGGSSGGRGG 66
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.48
Identities = 22/85 (25%), Positives = 24/85 (28%)
Frame = +1
Query: 745 PXAXLXAPXXPXNXFXPXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXP 924
P A A P + P PPPPP A + P PP P
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPPPPAVEDQAADAN----EPDDYYSSGRAVSPEIPPTYTP 229
Query: 925 XSRXQYXQPPPXVPXXXPRPPTXPS 999
PPP P P T S
Sbjct: 230 KQADPLPAPPPPPPPTLPPQSTNTS 254
Score = 28.3 bits (60), Expect = 1.9
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +1
Query: 793 PXXPPPPPPSXXPXAXPQTXLXXXXXXXTXXXPXXPXXPPLXXPXSRXQYXQPPPXVPXX 972
P PPPPPP+ P + + L P PPP P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQL--------------PMPSRNVNNLGSQVNIPPPPATPSQ 281
Query: 973 XPRPPTXPSVACXLT--PXAPXXPPPPXP 1053
PRPPT S T A PP P
Sbjct: 282 PPRPPTNASTRSTGTSSSMAHSYDSPPSP 310
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 802 PPPPPPSXXPXAXP 843
PPPPPP P + P
Sbjct: 11 PPPPPPGFEPPSQP 24
Score = 23.0 bits (47), Expect(2) = 0.51
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 793 PXXPPPPPP 819
P PPPPPP
Sbjct: 6 PGNPPPPPP 14
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.64
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +1
Query: 889 PXXPXXPPLXXPXSRX--QYXQP-PPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXP 1053
P P P P S Q P PP P P PP+ P + P PPPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP----PMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 910 PLXXPXSRXQYXQPPPXVPXXXPRPPTXPSVACXLTPXAPXXPP--PPXPXPA 1062
P+ P R Q PP + P PP P P PP PP P PA
Sbjct: 1686 PVSTPPVRPQ-SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 982 PPTXPSVACXLTPXAPXXPPPPXPXPAP 1065
PP P A AP PPPP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = +3
Query: 807 PASAXXXPXRAPSDXP----LLXPLFXHXVPPXPPXXPPPXTPXLXXPIXPAPXXR 962
P SA AP+ P + P +P PP PPP P P P P R
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 949 PPPXVPXXXPRPPTXPSVACXLTPXAPXXPPPPXPXPA 1062
PPP +P T P A A PPP P PA
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPA 404
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.9
Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = -1
Query: 1064 GAGXGXGGGGXXGAX-GVRXQATEGXVGGRGXXXGTXGGGWXYWXREXGXXRGGXXGXXG 888
G G G GGG G G G GG G G GG + G GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG----FGGGPGGFEGGPGGFGG 242
Query: 887 XXXVXEEGGEERXV*GXAXG-XXLGGGGGGXXG 792
GG + G G GGG GG G
Sbjct: 243 G-----PGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 949 PPPXVPXXXPR---PPTXPSVACXLTPXAPXXPPPPXPXPA 1062
PPP V P PP+ + A TP A P P PA
Sbjct: 49 PPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPA 89
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = +2
Query: 470 PXSXPVLXXXXDP---LPPPXXNXXPQLPPXARXQXXXPXLXTTHHPXSXXSSXPPCXXL 640
P S PV+ + +PPP N + + HH S PP +
Sbjct: 91 PLSKPVVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAHHAELPSGSVPPSASV 150
Query: 641 SRXXTLAXXSP 673
SR + A +P
Sbjct: 151 SRANSTATTTP 161
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 802 PPPPPPSXXPXAXP 843
PPPPPP P A P
Sbjct: 1882 PPPPPPMALPKAGP 1895
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,195,731
Number of Sequences: 5004
Number of extensions: 32295
Number of successful extensions: 327
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 561795324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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