Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_G05
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 125 3e-28
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 125 3e-28
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 125 3e-28
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 125 3e-28
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 125 3e-28
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 122 2e-27
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 75 3e-13
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 125 bits (301), Expect = 3e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 122 bits (293), Expect = 2e-27
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = +1
Query: 136 MIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYH 315
M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVRYH
Sbjct: 8 MVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYH 67
Query: 316 TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 417
TKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 68 TKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 120 bits (290), Expect = 5e-27
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = +2
Query: 425 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 601
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 602 SVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAENPDDVTK 745
AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 74.9 bits (176), Expect = 3e-13
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 545 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAXLVGIRAKRLKDAAE 724
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A L GIRAKR K+AAE
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,368,420
Number of Sequences: 237096
Number of extensions: 2067921
Number of successful extensions: 4102
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4072
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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