Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G02
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     80   2e-15
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    69   5e-12
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           64   1e-10
07_01_1001 - 8460467-8460799                                           49   4e-06
07_03_0321 + 16757414-16757743                                         47   2e-05
01_06_0098 - 26416768-26416998                                         34   0.13 
11_01_0651 - 5272442-5272718,5274026-5274081                           28   8.3  
04_03_0398 - 15393102-15393378,15394685-15394740                       28   8.3  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 36/67 (53%), Positives = 52/67 (77%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGG   P+A D++ +L SVG+EA+ E L+ +++EL GKD+ ++IAAGREK +
Sbjct: 4   IAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFA 63

Query: 314 SMPVGGG 334
           S+P GGG
Sbjct: 64  SVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 30/67 (44%), Positives = 47/67 (70%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           ++A  LA L G P P+A D+  +L SVG E D   ++ ++++L GKD+ ++IA+GREK +
Sbjct: 197 ISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFA 256

Query: 314 SMPVGGG 334
           S+P GGG
Sbjct: 257 SVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           ++A  +A L G   P A D+  +L SVG E D   ++ ++++++GKD+ +LIA GREK +
Sbjct: 4   ISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFA 63

Query: 314 SMPVGGG 334
           S+P GGG
Sbjct: 64  SVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 23/65 (35%), Positives = 38/65 (58%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  +A +GG   P   DV  +L +VG + D + L  +  ++ GKD+ +++AAG E L+
Sbjct: 4   VAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLA 63

Query: 314 SMPVG 328
              VG
Sbjct: 64  FGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 36/60 (60%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  +A +GG   P   DV  +L +VG + D + L  +  ++ GKD+ +++AAG E L+
Sbjct: 4   VAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 63


>01_06_0098 - 26416768-26416998
          Length = 76

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 164 GKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKD 274
           G PPP  A V +++ +V IEAD+   K ++  L GKD
Sbjct: 13  GPPPPPPA-VVKIIETVHIEADSAEFKSIVQRLTGKD 48


>11_01_0651 - 5272442-5272718,5274026-5274081
          Length = 110

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
 Frame = -1

Query: 238 LLSVSFDTDGAEEL--LNVSGSWRRLATQHSQXRRGQRNAXLKARXDTKRGXPKEERXVX 65
           L S S D+ G  ++  LN+S +   L    S   RG RN        T R        + 
Sbjct: 4   LTSPSRDSSGLADVYWLNMSST---LTASQSAWTRGSRNCHRPLVTGTARPLHGARSPLR 60

Query: 64  EQKPKVXKGRPR 29
             KP V  GRPR
Sbjct: 61  RSKPAVQAGRPR 72


>04_03_0398 - 15393102-15393378,15394685-15394740
          Length = 110

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
 Frame = -1

Query: 238 LLSVSFDTDGAEEL--LNVSGSWRRLATQHSQXRRGQRNAXLKARXDTKRGXPKEERXVX 65
           L S S D+ G  ++  LN+S +   L    S   RG RN        T R        + 
Sbjct: 4   LTSPSRDSSGLADVYWLNMSST---LTASQSAWTRGSRNCHRPLVTGTARPLHGARSPLR 60

Query: 64  EQKPKVXKGRPR 29
             KP V  GRPR
Sbjct: 61  RSKPAVQAGRPR 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,791,496
Number of Sequences: 37544
Number of extensions: 140482
Number of successful extensions: 407
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)