Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G02
         (856 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    89   7e-18
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    89   7e-18
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    89   7e-18
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    89   9e-18
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    89   9e-18

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 89.0 bits (211), Expect = 7e-18
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGGK  PA +D+E++LSSVG+E DAE L  VI EL GK ++ LI  GREKLS
Sbjct: 4   VAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLS 63

Query: 314 SMPVGGG 334
           SMPVGGG
Sbjct: 64  SMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 89.0 bits (211), Expect = 7e-18
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGGK  PA +D+E++LSSVG+E DAE L  VI EL GK ++ LI  GREKLS
Sbjct: 4   VAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLS 63

Query: 314 SMPVGGG 334
           SMPVGGG
Sbjct: 64  SMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 89.0 bits (211), Expect = 7e-18
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGGK  PA +D+E++LSSVG+E DAE L  VI EL GK ++ LI  GREKLS
Sbjct: 4   VAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLS 63

Query: 314 SMPVGGG 334
           SMPVGGG
Sbjct: 64  SMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 88.6 bits (210), Expect = 9e-18
 Identities = 44/67 (65%), Positives = 51/67 (76%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGGK  PA  D+E++LSSVG+E DAE L  VI EL GK ++ LI  GREKLS
Sbjct: 4   VAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLS 63

Query: 314 SMPVGGG 334
           SMPVGGG
Sbjct: 64  SMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 88.6 bits (210), Expect = 9e-18
 Identities = 44/67 (65%), Positives = 51/67 (76%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           +AA  LAVLGGK  PA  D+E++LSSVG+E DAE L  VI EL GK ++ LI  GREKLS
Sbjct: 4   VAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLS 63

Query: 314 SMPVGGG 334
           SMPVGGG
Sbjct: 64  SMPVGGG 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,645
Number of Sequences: 53049
Number of extensions: 211644
Number of successful extensions: 611
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)