Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G02
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    62   5e-10
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    60   2e-09

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 40/109 (36%), Positives = 51/109 (46%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           ++A  LAVLGG   P   D++ +LS+VG++ADAE  K V++ L GK VE+LIA G   L 
Sbjct: 4   VSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLV 63

Query: 314 SMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 460
           S  V GG                                   MGFGLFD
Sbjct: 64  S--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 134 LAASXLAVLGGKPPPAAADVEQLLSSVGIEADAEXLKXVITELNGKDVEQLIAAGREKLS 313
           L A  LA LGG   P+A DV ++L + G++ D E    V+  L GK + ++IA G+ KLS
Sbjct: 4   LGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLS 63

Query: 314 SMPVGG 331
           S+P GG
Sbjct: 64  SVPSGG 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,970,139
Number of Sequences: 27780
Number of extensions: 99806
Number of successful extensions: 206
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)