Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G01
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    30   4.8  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    30   4.8  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    30   4.8  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    30   4.8  
AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodom...    29   8.4  

>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 483
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 483
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 462 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 506


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 483
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 423


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 483
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodomain
           transcriptionfactor protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 483
           P  P +P SW     STN     + AN N+  + + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSRSHNNNNSSGGGSG 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,996,338
Number of Sequences: 53049
Number of extensions: 437709
Number of successful extensions: 1091
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)