Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_G01
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039044-9|AAG24119.1|  168|Caenorhabditis elegans Hypothetical ...    29   5.7  
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AF039044-9|AAG24119.1|  168|Caenorhabditis elegans Hypothetical
           protein F48G7.10 protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = -1

Query: 616 TNHXXTLPXXXRPXFCDRIPSRPYXRLRXGCSCQD 512
           TNH        RP FCD   S  Y   + G  C D
Sbjct: 112 TNHHFNKHFYTRPTFCDHCGSLLYGLSKQGVQCSD 146


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical
           protein F07C4.7 protein.
          Length = 180

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/55 (30%), Positives = 20/55 (36%)
 Frame = +1

Query: 349 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSGMTATGSGVWD 513
           PG P  PG W+  G    +GG   W N       +     GGR G      G  D
Sbjct: 37  PG-PRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGD 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,480,790
Number of Sequences: 27780
Number of extensions: 213764
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)