Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F19
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 227 7e-60
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 227 7e-60
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 227 7e-60
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 122 3e-28
07_03_1357 - 25982861-25983068,25983354-25983361 52 8e-07
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.39
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 31 0.89
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 4.7
02_05_1008 - 33461225-33462334 29 4.7
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 6.3
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 29 6.3
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 28 8.3
03_06_0069 - 31449319-31450368 28 8.3
01_05_0433 - 22094784-22095659 28 8.3
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 227 bits (556), Expect = 7e-60
Identities = 108/163 (66%), Positives = 132/163 (80%)
Frame = +3
Query: 189 EKARLXQALKLIGAYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 368
EK RL LKL+G YGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR
Sbjct: 22 EKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRR 81
Query: 369 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 548
+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q
Sbjct: 82 MNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQ 141
Query: 549 VVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 677
+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 142 IVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 184
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 227 bits (556), Expect = 7e-60
Identities = 108/163 (66%), Positives = 132/163 (80%)
Frame = +3
Query: 189 EKARLXQALKLIGAYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 368
EK RL LKL+G YGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR
Sbjct: 45 EKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRR 104
Query: 369 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 548
+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q
Sbjct: 105 MNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQ 164
Query: 549 VVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 677
+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 165 IVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 207
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 227 bits (556), Expect = 7e-60
Identities = 108/163 (66%), Positives = 132/163 (80%)
Frame = +3
Query: 189 EKARLXQALKLIGAYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 368
EK RL LKL+G YGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR
Sbjct: 238 EKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRR 297
Query: 369 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 548
+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q
Sbjct: 298 MNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQ 357
Query: 549 VVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 677
+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 358 IVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 400
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 122 bits (295), Expect = 3e-28
Identities = 66/115 (57%), Positives = 79/115 (68%)
Frame = +3
Query: 189 EKARLXQALKLIGAYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 368
EK R LKL G YGLR+K E+WRV+ ELLTL+EK+P+R+FEG ALLR
Sbjct: 22 EKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEALLRH 70
Query: 369 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 533
+ R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LIRQ HI
Sbjct: 71 MNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3
Query: 534 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 629
RV +Q+VNIPSFIVRL+S KHI FSL SP GG
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGG 34
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.39
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 315 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 482
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 483 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 575
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 682 RHPVPCGGSSS*HVP-GRPPPNGDFREKSMCLPESRR 575
R PVP G + HVP PPP+G FR P S R
Sbjct: 229 RPPVPTGPRPAAHVPRPTPPPHGGFRAPFSTPPSSAR 265
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 449 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 577
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +3
Query: 393 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 572
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 573 VRLDSGKHIDFSLKSPFGGGR 635
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 432 IEDFLERRLQTQVFKAGLAKSIHHAR 509
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 207 QALKLIGAYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 329
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 522 QRHIRVRKQVVNIPSFIVR-LDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTGW 680
+R + + +++ S ++R L G HID G GT +++EP + W
Sbjct: 103 ERELLSVRNLLSTQSALIRGLSEGVHIDSLTTGSEGSAEEGTDEDQEPSEIQNW 156
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 504 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 373
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>01_05_0433 - 22094784-22095659
Length = 291
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 643 VPGRPPPNGDFREKSMCLPESRRTINDGMFTTC 545
VPGR PP +R K M P RR G C
Sbjct: 47 VPGRVPPPPMYRPKPMQAPARRRRSRRGWCCAC 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,442,341
Number of Sequences: 37544
Number of extensions: 395706
Number of successful extensions: 1092
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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