Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F18
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   208   4e-54
Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  208 bits (508), Expect = 4e-54
 Identities = 99/149 (66%), Positives = 112/149 (75%)
 Frame = +2

Query: 167 PXPKLRXFDLGXQRAXVDXFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFH 346
           P  K+R FDLG +RA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGKD FH
Sbjct: 27  PDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFH 86

Query: 347 IRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQXIMSVRSSDRWKA 526
           +R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG  + S+R  +    
Sbjct: 87  LRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVK 146

Query: 527 QVIEALRRAKFKFPDVKRSTYQRSGGFTK 613
             IEA RRAKFKFP  +     R  GFTK
Sbjct: 147 HAIEAFRRAKFKFPGRQIIVSSRKWGFTK 175



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 88  LGRRPARCSRSCKNQPSPKSXFCRGVPXSQ 177
           +GRRPARC R  KN+P PKS FCRGVP ++
Sbjct: 1   MGRRPARCYRYIKNKPYPKSRFCRGVPDAK 30


>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 523 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 401
           +P VT A   + LSN  T  ST  LA   T  +L P+S  A
Sbjct: 46  VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 453 GLPNAPRIPVWSLSAPA 403
           G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,205,020
Number of Sequences: 27780
Number of extensions: 287639
Number of successful extensions: 671
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)