Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F17
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.3  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 74  VGFIXFITALFLDAIKLFTKXXTYPN 151
           V FI  +TALFL AI  F K  +  N
Sbjct: 292 VAFISIVTALFLVAIN-FNKSSSEEN 316


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 74  VGFIXFITALFLDAIKLFTKXXTYPN 151
           V FI  +TALFL AI  F K  +  N
Sbjct: 292 VAFISIVTALFLVAIN-FNKSSSEEN 316


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 245 ICFNLGILFFLCLTSLGVYIVII 313
           I FN+ +LF LCL    ++++ +
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFL 209


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 615 PPLLYSILNPETNSLSPS 562
           PP+   I+NP+    SPS
Sbjct: 410 PPMQSQIINPQPQITSPS 427


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,753
Number of Sequences: 336
Number of extensions: 1435
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)