Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F16
(1038 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.036
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.047
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 34 0.14
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 34 0.14
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 34 0.19
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.4
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 2.4
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 30 3.1
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 4.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.1
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 5.4
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 5.4
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.2
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 9.5
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 9.5
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 9.5
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.036
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G GP G GGG G G WG G G GG G G GG G
Sbjct: 50 GGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXW-GKXXRGW--RXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G GGG G GGG W G GW G N GG G G GG G
Sbjct: 42 GWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G G G G GGG WG G G GG G G G G
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -3
Query: 808 GGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
GG G GGG WG+ G G GG + G G +WGG G
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNN---GGGGNWGGNGG 86
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G GGG G GGG G G R G G G G GG G
Sbjct: 77 GGGNWGGNGGG---GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.047
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -3
Query: 832 GAGPXXGXG-GGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G GP G GG G GG WG G G GG G G +WGG G
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXG--XGXSWGGXXGW 659
G G G GGG G GGG WG G G N GG G G + GG W
Sbjct: 56 GWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNW 115
Score = 32.7 bits (71), Expect = 0.44
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -3
Query: 835 RGAGPXXGX-GGGXVIGXXGGGLX-WGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
RG G G GGG G GGG WG G R G G G G +WGG
Sbjct: 63 RGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGR--GDWGGNNNGGGGNWGG 117
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = -3
Query: 832 GAGPXX---GXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G GP GGG G GG WG G G N GG G G GG G
Sbjct: 43 GGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRG 102
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Frame = -3
Query: 832 GAGPXXGXGG-----GXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGX 668
G G G GG G G GGG G+ G G + GG S G G S G
Sbjct: 31 GIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGS 90
Query: 667 XGW 659
GW
Sbjct: 91 GGW 93
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -3
Query: 835 RGAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
RG G G GG G GG G G + G + GG S G S GG G
Sbjct: 67 RGGGSGGGRGGSG--GAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGG 122
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G+G G GG G GG WG G + GG G WGG G
Sbjct: 163 GSGGQGGWGGSQDGGSQGG---WGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGG 216
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 34.3 bits (75), Expect = 0.14
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
GAGP G GG G G G G G+ GP +GG G G GG G
Sbjct: 94 GAGPIGGGFGGAQGGYAGAGPIGGGAQGGYAGAGP-IGGGAQGGYAGAGPIGGGAQG 149
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.19
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXAS--XXXGXGXSWGGXXG 662
G G G GGG G GG G G G N+G S G G ++GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGG 111
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -3
Query: 814 GXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G GG ++G G G G GG G G S GG G
Sbjct: 36 GGAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGG 86
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G GGG G GGG G G G GG G G GG G
Sbjct: 128 GCGGGCGGGGGGGCGGGGGG-GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G G G GGG G GGG G G G GG G G GG
Sbjct: 136 GGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 826 GPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G GGG G GGG G G G GG G G GG G
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G GGG G GGG G G G GG G G GG G
Sbjct: 134 GGGGGGGCGGGGGGGCGGGG---GGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXGW 659
G G G GGG G GG G G+ G GG G G S G G+
Sbjct: 176 GGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGY 233
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGK-XXRGWRXXGPNLGGXXASXXXGXGXSWGGXXGW 659
G G G GGG G GG +G G G + GG G G GG G+
Sbjct: 125 GGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGY 183
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G G G G GGG G G G GG S G G GG G
Sbjct: 184 GGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYG 240
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 826 GPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G G GGG G GGG G G G GG G G GG
Sbjct: 151 GYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGG 202
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G GGG G GG G G G GG G G GG G
Sbjct: 75 GRGGYGGSGGG-AFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYG 130
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G G GG G GGG +G G G GG G GG G
Sbjct: 83 GGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGG 139
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXAS 704
G GP G GGG G GGG+ G G GG A+
Sbjct: 324 GGGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGGGGAT 366
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 166 GFSVPXXAFCKSVGLQKSLLTTSGIAQRPRAASG 65
GFS P + C+SVG + + S +A R ASG
Sbjct: 626 GFSAPDLSACESVGSRSAREVVSSVAGNARNASG 659
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 638 LXXLHPXPPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
L HP PP PPP T P PP + + +PP
Sbjct: 938 LPEYHPSPP-VPPPIPAIRHRTPSPPPPPLPSSTPP 972
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G G G GGG G GGG G G G GG S G +GG
Sbjct: 476 GFGSFGGGGGGGGFGGGGGGFGGGGGGFG---SGSPFGGAAPSPPSGPDPDFGG 526
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 653 PXPPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
P PP PP P AG PP SPP
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 659 PPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
PP PPP P +G PP A SPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 653 PXPPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
P PP PP P AG PP SPP
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 659 PPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
PP PPP P +G PP A SPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 653 PXPPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
P PP PP P AG PP SPP
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 659 PPXXPPPAXXXPXXTAGPXPP*IWAXSPP 745
PP PPP P +G PP A SPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGG 716
G GP G GGG G GGG+ G G GG
Sbjct: 218 GGGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGG 256
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = -3
Query: 814 GXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G GG ++G G G G GG G G ++GG G
Sbjct: 36 GGAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGG 86
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -3
Query: 826 GPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXS-WGGXXG 662
GP G GGG GGG WG GWR + GG G G WGG G
Sbjct: 27 GPYGGYGGG-----YGGG-PWG-YGGGWRRR--HWGGYGGGPWGGYGGGPWGGYYG 73
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G+ G GG G GGG G G N GG + G G G G
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G+G G GGG G GGG G G N GG G G GG
Sbjct: 796 GSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGN-GGGGNGNGGGAGDGNGG 848
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -3
Query: 826 GPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G GGG G GGG G G G GG G G G G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = -3
Query: 829 AGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
+G G GGG G GGG G G P+ GG G G S GG
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCG----GGGSSGGG 200
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -3
Query: 826 GPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
G G GGG G GGG G G G GG G G G G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = -3
Query: 829 AGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
+G G GGG G GGG G G P+ GG G G S GG
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCG----GGGSSGGG 200
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 653 PXPPXXPPPAXXXPXXTAGPXPP*IWAXSP 742
P PP PPP P P PP + + SP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -3
Query: 805 GGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGGXXG 662
GG V G GGG + + G G N+GG S GG G
Sbjct: 58 GGGVNGAGGGGNAYRRNGGGGGGGGRNIGGLPTSSGVAPPPMGGGCCG 105
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G G G GGG G GGG G G GG ++ S+GG
Sbjct: 104 GGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGG 157
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGGGLXWGKXXRGWRXXGPNLGGXXASXXXGXGXSWGG 671
G G G G G G GGG + G G GG G G GG
Sbjct: 220 GGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGG--GLXWGKXXRGWR--XXGPNL---GGXXASXXXGXGXSWG 674
G G G GGG G GG G WG+ G + GP GG G WG
Sbjct: 199 GPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWG 258
Query: 673 G 671
G
Sbjct: 259 G 259
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Frame = -3
Query: 832 GAGPXXGXGGGXVIGXXGG--GLXWGKXXRGWR--XXGPNL---GGXXASXXXGXGXSWG 674
G G G GGG G GG G WG+ G + GP GG G WG
Sbjct: 237 GPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWG 296
Query: 673 G 671
G
Sbjct: 297 G 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,106,663
Number of Sequences: 27780
Number of extensions: 191962
Number of successful extensions: 1014
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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