Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F15
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    36   1.5  
UniRef50_UPI0000D5542F Cluster: PREDICTED: similar to CG1105-PA;...    35   2.6  
UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    34   3.4  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 242 FWGGGXXLFXIPXKGGXPPXGXXXPPPXFGXWG 340
           F+GGG      P +GG PP     PPP F  WG
Sbjct: 111 FFGGGGGFVXXPPRGGAPPPPGGAPPPLF-FWG 142


>UniRef50_UPI0000D5542F Cluster: PREDICTED: similar to CG1105-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG1105-PA - Tribolium castaneum
          Length = 533

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 342 GPHXPXXGGGXXNPXGGXPPXXGIXKXFXPPP 247
           G + P  GG    P GG PP  G    F PPP
Sbjct: 409 GAYPPPPGGAYPPPAGGYPPAGGTSPGFYPPP 440


>UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 1130

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -2

Query: 406 PPPLFXXXXXGFXXPXXGALXXPPXPKXXXGXXXPPGGXPP 284
           PPP +     G+  P  G    PP P    G   PPG  PP
Sbjct: 746 PPPGWQGPPPGWHGPPPGQFHGPPPPGWAPGHPPPPGWAPP 786


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,368,822
Number of Sequences: 1657284
Number of extensions: 4899878
Number of successful extensions: 7146
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6530
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)