Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F15
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = -3

Query: 405 PPPFFXKKXGXFXXPXXGXXXGPHXPXXGGGXXNPXGGXPPXXGIXKXFXPPP 247
           PP  F      F  P      G + P   GG   P    PP  G    F PPP
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG-PGGFGPPP 437


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 23/79 (29%), Positives = 26/79 (32%)
 Frame = -2

Query: 406 PPPLFXXXXXGFXXPXXGALXXPPXPKXXXGXXXPPGGXPPLXGDXKKXXTSPPKXXXXP 227
           PPP+      GF  P  G    PP P    G   PP   PP+ G        PP     P
Sbjct: 66  PPPV----PNGFIPPPPGPGGIPPPPPMFAGGIPPP---PPMMG----GIPPPPPMFGAP 114

Query: 226 XPWXXXXFLXXXPSXXNPR 170
            P      L   P    P+
Sbjct: 115 PPPPPPSGLGVAPQPPRPK 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,703,898
Number of Sequences: 27780
Number of extensions: 125626
Number of successful extensions: 283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)